RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ATP5JP18859 108 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-216ENST00000583804 MCAMP43121 646 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 RASGRF1Q13972 1273 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 TTLL5Q6EMB2 1281 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 SPATA5Q8NB90 893 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-216ENST00000583804 HMG20BQ9P0W2 317 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 UTRNP46939 3433 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 COL4A5P29400 1685 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 USP17L3A6NCW0 530 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 USP17L4A6NCW7 530 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 FZD9O00144 591 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 ERC2O15083 957 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 CXCL9Q07325 125 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 PI16Q6UXB8 463 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 USP17L1Q7RTZ2 530 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
TOP3A-216ENST00000583804 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
TOP3A-216ENST00000583804 ARAP2Q8WZ64 1704 aa13.33□□□□□ -0.27
TOP3A-216ENST00000583804 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.27
TOP3A-216ENST00000583804 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.28
TOP3A-216ENST00000583804 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.28
TOP3A-216ENST00000583804 ZAP70P43403 619 aa13.33□□□□□ -0.28
TOP3A-216ENST00000583804 TNIP1Q15025 636 aa13.33□□□□□ -0.28
TOP3A-216ENST00000583804 CIAPIN1Q6FI81 312 aa13.33□□□□□ -0.28
TOP3A-216ENST00000583804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
TOP3A-216ENST00000583804 MXD3Q9BW11 206 aa13.33□□□□□ -0.28
TOP3A-216ENST00000583804 PSMD14O00487 310 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 GSPT1P15170 499 aaKnown RBP13.32□□□□□ -0.28
TOP3A-216ENST00000583804 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 WDR66Q8TBY9 1149 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 SBF1O95248 1867 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 FAM205AQ6ZU69 1335 aa13.32□□□□□ -0.28
TOP3A-216ENST00000583804 GOLIM4O00461 696 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 MFSD14BQ5SR56 506 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 DACT2Q5SW24 774 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 TBC1D9Q6ZT07 1266 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 HAUS7Q99871 368 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
TOP3A-216ENST00000583804 CYP2E1P05181 493 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
TOP3A-216ENST00000583804 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
TOP3A-216ENST00000583804 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 AOX1Q06278 1338 aa13.3□□□□□ -0.28
TOP3A-216ENST00000583804 COL1A1P02452 1464 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-216ENST00000583804 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 F8W031 263 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 ZBTB22O15209 634 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 YY1P25490 414 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 CHD4Q14839 1912 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 PDS5AQ29RF7 1337 aaKnown RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 GRIK5Q16478 980 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 SPTY2D1Q68D10 685 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 KIAA0825Q8IV33 1275 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 GPC2Q8N158 579 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 CERS5Q8N5B7 392 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 PIH1D3Q9NQM4 214 aaKnown RBP13.29□□□□□ -0.28
TOP3A-216ENST00000583804 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
TOP3A-216ENST00000583804 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 DICER1Q9UPY3 1922 aaKnown RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 FKBP1AP62942 108 aaKnown RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
TOP3A-216ENST00000583804 SCN9AQ15858 1988 aa13.28□□□□□ -0.28
TOP3A-216ENST00000583804 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
TOP3A-216ENST00000583804 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
TOP3A-216ENST00000583804 PRDX5P30044 214 aa13.27□□□□□ -0.29
TOP3A-216ENST00000583804 AGBL3Q8NEM8 1001 aa13.27□□□□□ -0.29
TOP3A-216ENST00000583804 TIAM2Q8IVF5 1701 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 GLTPD2A6NH11 291 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 SDSP20132 328 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
TOP3A-216ENST00000583804 MAP3K12Q12852 859 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 DZIP1Q86YF9 867 aaKnown RBP13.26□□□□□ -0.29
TOP3A-216ENST00000583804 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 EVI5LQ96CN4 794 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 FSD1Q9BTV5 496 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms