RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
UBBP4-201ENST00000583708 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
UBBP4-201ENST00000583708 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
UBBP4-201ENST00000583708 CCDC8Q9H0W5 538 aaPredicted RBP11.37□□□□□ -0.59
UBBP4-201ENST00000583708 DBNDD1Q9H9R9 158 aa11.37□□□□□ -0.59
UBBP4-201ENST00000583708 CACNA1SQ13698 1873 aa11.37□□□□□ -0.59
UBBP4-201ENST00000583708 MAST3O60307 1309 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 WTIPA6NIX2 430 aaPredicted RBP11.36□□□□□ -0.59
UBBP4-201ENST00000583708 YDJCA8MPS7 323 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 APBB1O00213 710 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 ADORA1P30542 326 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 PHKA1P46020 1223 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 GTF2IP78347 998 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 SPATA5Q8NB90 893 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 HDAC9Q9UKV0 1011 aa11.36□□□□□ -0.59
UBBP4-201ENST00000583708 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
UBBP4-201ENST00000583708 MAP4K4O95819 1239 aaPredicted RBP11.35□□□□□ -0.59
UBBP4-201ENST00000583708 MX1P20591 662 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 KLRK1P26718 216 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 GPR101Q96P66 508 aaPredicted RBP11.35□□□□□ -0.59
UBBP4-201ENST00000583708 GMLQ99445 158 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 HAUS7Q99871 368 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
UBBP4-201ENST00000583708 SBF1O95248 1867 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 SPEF2Q9C093 1822 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
UBBP4-201ENST00000583708 H7C1D1 291 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 PSMD14O00487 310 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
UBBP4-201ENST00000583708 RAD17O75943 681 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 LDHCP07864 332 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
UBBP4-201ENST00000583708 PDE1AP54750 535 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 GSTO1P78417 241 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 MFSD14BQ5SR56 506 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 LNPKQ9C0E8 428 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
UBBP4-201ENST00000583708 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-201ENST00000583708 MCAMP43121 646 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-201ENST00000583708 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 PNMA8AQ86V59 439 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-201ENST00000583708 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
UBBP4-201ENST00000583708 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 CHD4Q14839 1912 aa11.33□□□□□ -0.6
UBBP4-201ENST00000583708 ARAP2Q8WZ64 1704 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
UBBP4-201ENST00000583708 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
UBBP4-201ENST00000583708 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 PLEKHM2Q8IWE5 1019 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBBP4-201ENST00000583708 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
UBBP4-201ENST00000583708 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 HACL1Q9UJ83 578 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
UBBP4-201ENST00000583708 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 C16orf71Q8IYS4 520 aaPredicted RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 PAG1Q9NWQ8 432 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 LRP2BPQ9P2M1 347 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
UBBP4-201ENST00000583708 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
UBBP4-201ENST00000583708 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-201ENST00000583708 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-201ENST00000583708 ZAP70P43403 619 aa11.3□□□□□ -0.6
UBBP4-201ENST00000583708 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
UBBP4-201ENST00000583708 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
UBBP4-201ENST00000583708 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
UBBP4-201ENST00000583708 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-201ENST00000583708 COL4A5P29400 1685 aa11.3□□□□□ -0.6
UBBP4-201ENST00000583708 UTRNP46939 3433 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 HIP1O00291 1037 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 SCNN1DP51172 638 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 SCARF1Q14162 830 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 FKBP1CQ5VVH2 108 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
UBBP4-201ENST00000583708 CNTROBQ8N137 903 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 ABCF2Q9UG63 623 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 TTF2Q9UNY4 1162 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms