RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 LDHBP07195 334 aaKnown RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 MCM4P33991 863 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 INF2Q27J81 1249 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 MSH6P52701 1360 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 HSPA4P34932 840 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 HS2ST1Q7LGA3 356 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 LEO1Q8WVC0 666 aaPredicted RBP12.74□□□□□ -0.37
MSI2-217ENST00000583705 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
MSI2-217ENST00000583705 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
MSI2-217ENST00000583705 CYLC1P35663 651 aaPredicted RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 MCM6Q14566 821 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
MSI2-217ENST00000583705 FRMD4BQ9Y2L6 1034 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 KIF2AO00139 706 aaPredicted RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 ADCY5O95622 1261 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 METTL13Q8N6R0 699 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 PYM1Q9BRP8 204 aaKnown RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 UBXN1Q04323 297 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 USTQ9Y2C2 406 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 MAN1A1P33908 653 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 NEK11Q8NG66 645 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 SKA2Q8WVK7 121 aaPredicted RBP12.73□□□□□ -0.37
MSI2-217ENST00000583705 CHMP6Q96FZ7 201 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 SF3A3Q12874 501 aaKnown RBP eCLIP12.73□□□□□ -0.374e-7■■■■□ 21.1
MSI2-217ENST00000583705 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 MED10Q9BTT4 135 aa12.73□□□□□ -0.37
MSI2-217ENST00000583705 STRN3Q13033 797 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 BSPRYQ5W0U4 402 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
MSI2-217ENST00000583705 ZNF830Q96NB3 372 aaPredicted RBP12.72□□□□□ -0.37
MSI2-217ENST00000583705 TRAF1Q13077 416 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 UBLCP1Q8WVY7 318 aaPredicted RBP12.72□□□□□ -0.37
MSI2-217ENST00000583705 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 RIOK1Q9BRS2 568 aaKnown RBP12.72□□□□□ -0.37
MSI2-217ENST00000583705 ECHDC1Q9NTX5 307 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 Q6ZUG5 572 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 BRF1Q92994 677 aa12.72□□□□□ -0.37
MSI2-217ENST00000583705 DACT3Q96B18 629 aaPredicted RBP12.72□□□□□ -0.37
MSI2-217ENST00000583705 KRT2P35908 639 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 PSMA7O14818 248 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 ZEB2O60315 1214 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 ITIH3Q06033 890 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 ITKQ08881 620 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 MNAT1P51948 309 aa12.71□□□□□ -0.37
MSI2-217ENST00000583705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
MSI2-217ENST00000583705 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 PRPHP41219 470 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 PARD3BQ8TEW8 1205 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 UFL1O94874 794 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
MSI2-217ENST00000583705 BANK1Q8NDB2 785 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 LRRC43Q8N309 656 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 LARGE2Q8N3Y3 721 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 CCDC110Q8TBZ0 833 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 CCDC170Q8IYT3 715 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 EYA3Q99504 573 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 ZNF165P49910 485 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 ANKS4BQ8N8V4 417 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 OATP04181 439 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 BZW2Q9Y6E2 419 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
MSI2-217ENST00000583705 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
MSI2-217ENST00000583705 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms