RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
ITGB4-209ENST00000583327 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
ITGB4-209ENST00000583327 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
ITGB4-209ENST00000583327 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
ITGB4-209ENST00000583327 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
ITGB4-209ENST00000583327 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
ITGB4-209ENST00000583327 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
ITGB4-209ENST00000583327 ECE2O60344 883 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 FKBP1AP62942 108 aaKnown RBP16.61■□□□□ 0.25
ITGB4-209ENST00000583327 RASSF7Q02833 373 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 KCNQ5Q9NR82 932 aa16.61■□□□□ 0.25
ITGB4-209ENST00000583327 FZD9O00144 591 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
ITGB4-209ENST00000583327 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 LARGE2Q8N3Y3 721 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
ITGB4-209ENST00000583327 PIH1D3Q9NQM4 214 aaKnown RBP16.6■□□□□ 0.25
ITGB4-209ENST00000583327 ZNRF3Q9ULT6 936 aa16.6■□□□□ 0.25
ITGB4-209ENST00000583327 CHD4Q14839 1912 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 GOLIM4O00461 696 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 MAP4K4O95819 1239 aaPredicted RBP16.59■□□□□ 0.25
ITGB4-209ENST00000583327 LMNB1P20700 586 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
ITGB4-209ENST00000583327 ZNF646O15015 1829 aaPredicted RBP16.59■□□□□ 0.25
ITGB4-209ENST00000583327 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
ITGB4-209ENST00000583327 GTF2IP78347 998 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 GPR162Q16538 588 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 TBC1D22AQ8WUA7 517 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 RFX7Q2KHR2 1363 aa16.58■□□□□ 0.24
ITGB4-209ENST00000583327 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 G3V3G9 751 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 VIL1P09327 827 aaKnown RBP16.57■□□□□ 0.24
ITGB4-209ENST00000583327 CXCL9Q07325 125 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
ITGB4-209ENST00000583327 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 NIM1KQ8IY84 436 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
ITGB4-209ENST00000583327 CERS5Q8N5B7 392 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 GMLQ99445 158 aa16.57■□□□□ 0.24
ITGB4-209ENST00000583327 CHAF1AQ13111 956 aaPredicted RBP16.56■□□□□ 0.24
ITGB4-209ENST00000583327 GRIK5Q16478 980 aa16.56■□□□□ 0.24
ITGB4-209ENST00000583327 ZNF384Q8TF68 577 aa16.56■□□□□ 0.24
ITGB4-209ENST00000583327 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
ITGB4-209ENST00000583327 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
ITGB4-209ENST00000583327 SBF1O95248 1867 aa16.56■□□□□ 0.24
ITGB4-209ENST00000583327 DOCK2Q92608 1830 aa16.55■□□□□ 0.24
ITGB4-209ENST00000583327 TCRBV5S4A2TA0A5A2 114 aa16.55■□□□□ 0.24
ITGB4-209ENST00000583327 CHMLP26374 656 aa16.55■□□□□ 0.24
ITGB4-209ENST00000583327 SPTY2D1Q68D10 685 aaPredicted RBP16.55■□□□□ 0.24
ITGB4-209ENST00000583327 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
ITGB4-209ENST00000583327 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
ITGB4-209ENST00000583327 PSME4Q14997 1843 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 ZFYP08048 801 aaPredicted RBP16.54■□□□□ 0.24
ITGB4-209ENST00000583327 PRDX5P30044 214 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 ADD2P35612 726 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 MFSD14BQ5SR56 506 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 NSUN4Q96CB9 384 aaKnown RBP16.54■□□□□ 0.24
ITGB4-209ENST00000583327 FAM163AQ96GL9 167 aaPredicted RBP16.54■□□□□ 0.24
ITGB4-209ENST00000583327 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
ITGB4-209ENST00000583327 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
ITGB4-209ENST00000583327 PSMD14O00487 310 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
ITGB4-209ENST00000583327 CDC45O75419 566 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 CHGBP05060 677 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 C8orf34Q49A92 452 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
ITGB4-209ENST00000583327 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
ITGB4-209ENST00000583327 HIP1O00291 1037 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 RAD17O75943 681 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
ITGB4-209ENST00000583327 PDE6AP16499 860 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 MECOMQ03112 1051 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 TNIP1Q15025 636 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.24
ITGB4-209ENST00000583327 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 SLC9C2Q5TAH2 1124 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 C9orf131Q5VYM1 1079 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
ITGB4-209ENST00000583327 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.24
ITGB4-209ENST00000583327 MYH13Q9UKX3 1938 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms