RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ZNF587Q96SQ5 575 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 FAM8A1Q9UBU6 413 aa9.3□□□□□ -0.92
SMARCE1-219ENST00000583294 RECKO95980 971 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 ALBP02768 609 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 CTSHP09668 335 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 VAMP1P23763 118 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 COL9A3Q14050 684 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 ADAMTSL4Q6UY14 1074 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 TMEM87AQ8NBN3 555 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 SRCIN1Q9C0H9 1055 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 ABCB6Q9NP58 842 aa9.29□□□□□ -0.92
SMARCE1-219ENST00000583294 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-219ENST00000583294 DTHD1Q6ZMT9 781 aa9.28□□□□□ -0.92
SMARCE1-219ENST00000583294 BHLHE41Q9C0J9 482 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-219ENST00000583294 FRRS1LQ9P0K9 344 aa9.28□□□□□ -0.92
SMARCE1-219ENST00000583294 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
SMARCE1-219ENST00000583294 A0A096LPE4 126 aa9.27□□□□□ -0.93
SMARCE1-219ENST00000583294 A0A1W2PPZ6 126 aa9.27□□□□□ -0.93
SMARCE1-219ENST00000583294 K7ELQ4 463 aaPredicted RBP9.27□□□□□ -0.93
SMARCE1-219ENST00000583294 MEI1Q5TIA1 1274 aa9.27□□□□□ -0.93
SMARCE1-219ENST00000583294 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 PTPRAP18433 802 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 CDC25BP30305 580 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 GSTT1P30711 240 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 LDLRAD1Q5T700 205 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 C20orf204Q6ZNR8 217 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 CRELD1Q96HD1 420 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 MUC3BQ9H195 1237 aa9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 SH2B1Q9NRF2 756 aaPredicted RBP9.26□□□□□ -0.93
SMARCE1-219ENST00000583294 SPATA31C1P0DKV0 1188 aa9.25□□□□□ -0.93
SMARCE1-219ENST00000583294 RANGAP1P46060 587 aaPredicted RBP9.25□□□□□ -0.93
SMARCE1-219ENST00000583294 C3orf58Q8NDZ4 430 aa9.25□□□□□ -0.93
SMARCE1-219ENST00000583294 BSNDQ8WZ55 320 aa9.25□□□□□ -0.93
SMARCE1-219ENST00000583294 LILRB5O75023 590 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 DOC2BQ14184 412 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 GRIK5Q16478 980 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 IL22RA1Q8N6P7 574 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 TTC9Q92623 222 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 TTF2Q9UNY4 1162 aaKnown RBP9.24□□□□□ -0.93
SMARCE1-219ENST00000583294 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
SMARCE1-219ENST00000583294 FBXO24O75426 580 aa9.23□□□□□ -0.93
SMARCE1-219ENST00000583294 NID1P14543 1247 aa9.23□□□□□ -0.93
SMARCE1-219ENST00000583294 CDC27P30260 824 aa9.23□□□□□ -0.93
SMARCE1-219ENST00000583294 AFF1P51825 1210 aaKnown RBP9.23□□□□□ -0.93
SMARCE1-219ENST00000583294 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 XRCC5P13010 732 aaKnown RBP9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 ITPKAP23677 461 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 TAF1CQ15572 869 aaPredicted RBP9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 PRRT3Q5FWE3 981 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 C9orf131Q5VYM1 1079 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 ADAM19Q9H013 955 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 ZNF576Q9H609 170 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 SOX13Q9UN79 622 aa9.22□□□□□ -0.93
SMARCE1-219ENST00000583294 SCAMP3O14828 347 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 TCF3P15923 654 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 EPHA1P21709 976 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 GATA4P43694 442 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 ZNF157P51786 506 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 TRIM28Q13263 835 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 TPTE2Q6XPS3 522 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 VN1R5Q7Z5H4 357 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 USP31Q70CQ4 1352 aa9.21□□□□□ -0.94
SMARCE1-219ENST00000583294 PCDH1Q08174 1060 aa9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 FAAP100Q0VG06 881 aa9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 GRIK4Q16099 956 aa9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 TXNDC11Q6PKC3 985 aa9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 WFDC8Q8IUA0 241 aa9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 CLEC4MQ9H2X3 399 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-219ENST00000583294 LINC01387J3KSC0 135 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 ZNF76P36508 570 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 CABP4P57796 275 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 PTPN12Q05209 780 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 DMRTC2Q8IXT2 367 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 ZFYVE1Q9HBF4 777 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 GPN3Q9UHW5 284 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 PPME1Q9Y570 386 aa9.19□□□□□ -0.94
SMARCE1-219ENST00000583294 APBA3O96018 575 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 HDLBPQ00341 1268 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 IGSF5Q9NSI5 407 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 PPM1HQ9ULR3 514 aa9.18□□□□□ -0.94
SMARCE1-219ENST00000583294 ESRRAP11474 423 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 FANCCQ00597 558 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 IKBKEQ14164 716 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 RPS26P11Q5JNZ5 115 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 CACTIN-AS1Q8N1I8 211 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 SLC7A3Q8WY07 619 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 RNF34Q969K3 372 aa9.17□□□□□ -0.94
SMARCE1-219ENST00000583294 H3BRJ5 948 aa9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 SOX1O00570 391 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 ITGB7P26010 798 aa9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 ST13P50502 369 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms