RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
SRSF1-205ENST00000582730 ZNF213O14771 459 aa16.08■□□□□ 0.16
SRSF1-205ENST00000582730 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
SRSF1-205ENST00000582730 INTS5Q6P9B9 1019 aaKnown RBP16.08■□□□□ 0.16
SRSF1-205ENST00000582730 PIH1D3Q9NQM4 214 aaKnown RBP16.08■□□□□ 0.16
SRSF1-205ENST00000582730 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
SRSF1-205ENST00000582730 LIG1P18858 919 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 MPNDQ8N594 471 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
SRSF1-205ENST00000582730 ITPK1Q13572 414 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 PUM3Q15397 648 aaKnown RBP16.07■□□□□ 0.16
SRSF1-205ENST00000582730 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
SRSF1-205ENST00000582730 USP25Q9UHP3 1055 aa16.07■□□□□ 0.16
SRSF1-205ENST00000582730 FOXP2O15409 715 aa16.06■□□□□ 0.16
SRSF1-205ENST00000582730 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
SRSF1-205ENST00000582730 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
SRSF1-205ENST00000582730 PRC1O43663 620 aa16.06■□□□□ 0.16
SRSF1-205ENST00000582730 CTDNEP1O95476 244 aa16.06■□□□□ 0.16
SRSF1-205ENST00000582730 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
SRSF1-205ENST00000582730 MTERF4Q7Z6M4 381 aaKnown RBP16.06■□□□□ 0.16
SRSF1-205ENST00000582730 KCNQ2O43526 872 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 ADD2P35612 726 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
SRSF1-205ENST00000582730 RESTQ13127 1097 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
SRSF1-205ENST00000582730 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 NUP98P52948 1817 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 KCNQ4P56696 695 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 LPIN2Q92539 896 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 SLC5A1P13866 664 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 SMARCC2Q8TAQ2 1214 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SRSF1-205ENST00000582730 TRDNQ13061 729 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
SRSF1-205ENST00000582730 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 ELP1O95163 1332 aa16.04■□□□□ 0.16
SRSF1-205ENST00000582730 AHDC1Q5TGY3 1603 aaPredicted RBP16.04■□□□□ 0.16
SRSF1-205ENST00000582730 PDE6AP16499 860 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 FAM98CQ17RN3 349 aaKnown RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 SMAP1Q8IYB5 467 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 TNMDQ9H2S6 317 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 CPLX1O14810 134 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 CCDC152Q4G0S7 254 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 ZNF274Q96GC6 653 aaPredicted RBP16.03■□□□□ 0.16
SRSF1-205ENST00000582730 DENND2AQ9ULE3 1009 aa16.03■□□□□ 0.16
SRSF1-205ENST00000582730 MYH3P11055 1940 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 CCDC192P0DO97 292 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 PLCH1Q4KWH8 1693 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 MAGEB6Q8N7X4 407 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 SPATA5Q8NB90 893 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
SRSF1-205ENST00000582730 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.16
SRSF1-205ENST00000582730 OTUD7BQ6GQQ9 843 aa16.02■□□□□ 0.15
SRSF1-205ENST00000582730 SPATA31A5Q5VU36 1347 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 SPATA31A7Q8IWB4 1347 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 RASGRF1Q13972 1273 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-205ENST00000582730 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-205ENST00000582730 PARP10Q53GL7 1025 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-205ENST00000582730 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.01■□□□□ 0.15
SRSF1-205ENST00000582730 SLIT2O94813 1529 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 KDM4AO75164 1064 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 SMIM5Q71RC9 77 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
SRSF1-205ENST00000582730 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 COL22A1Q8NFW1 1626 aaPredicted RBP16■□□□□ 0.15
SRSF1-205ENST00000582730 NR1I2O75469 434 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 RXRAP19793 462 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
SRSF1-205ENST00000582730 BCAMP50895 628 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 ANTXR2P58335 489 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 KIAA2012Q0VF49 1180 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 MAP3K12Q12852 859 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms