RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TAF1P21675 1872 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 WNT10BO00744 389 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 EN2P19622 333 aaPredicted RBP8.16□□□□□ -1.1
TVP23B-210ENST00000582288 EIF2S2P20042 333 aaKnown RBP8.16□□□□□ -1.1
TVP23B-210ENST00000582288 PTPN12Q05209 780 aaKnown RBP8.16□□□□□ -1.1
TVP23B-210ENST00000582288 ARHGEF6Q15052 776 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 OTUD7BQ6GQQ9 843 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 APOBEC3FQ8IUX4 373 aaKnown RBP8.16□□□□□ -1.1
TVP23B-210ENST00000582288 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
TVP23B-210ENST00000582288 XDHP47989 1333 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 DLL1O00548 723 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
TVP23B-210ENST00000582288 HOXB7P09629 217 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 AIMP1Q12904 312 aaKnown RBP8.15□□□□□ -1.1
TVP23B-210ENST00000582288 NBPF9Q3BBW0 867 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 STRIP1Q5VSL9 837 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 ZNF333Q96JL9 665 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 IRX2Q9BZI1 471 aaPredicted RBP8.15□□□□□ -1.1
TVP23B-210ENST00000582288 EFCC1Q9HA90 598 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
TVP23B-210ENST00000582288 MED23Q9ULK4 1368 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
TVP23B-210ENST00000582288 ANXA1P04083 346 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 SP3Q02447 781 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 GSE1Q14687 1217 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 DACT2Q5SW24 774 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 PRAMEF18Q5VWM3 479 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
TVP23B-210ENST00000582288 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 COL4A1P02462 1669 aa8.14□□□□□ -1.11
TVP23B-210ENST00000582288 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 H0YGN5 161 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 IGF2BP3O00425 579 aaKnown RBP eCLIP8.13□□□□□ -1.11
TVP23B-210ENST00000582288 PPP1R12BO60237 982 aaPredicted RBP8.13□□□□□ -1.11
TVP23B-210ENST00000582288 RGS20O76081 388 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 LMOD3Q0VAK6 560 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 ZBED3Q96IU2 234 aaPredicted RBP8.13□□□□□ -1.11
TVP23B-210ENST00000582288 WNK4Q96J92 1243 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 DBF4Q9UBU7 674 aaPredicted RBP8.13□□□□□ -1.11
TVP23B-210ENST00000582288 ANGEL1Q9UNK9 670 aaKnown RBP8.13□□□□□ -1.11
TVP23B-210ENST00000582288 COL6A3P12111 3177 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 A0A0C4DFX4 3053 aa8.13□□□□□ -1.11
TVP23B-210ENST00000582288 A0A1W2PPC1 479 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 PDE8AO60658 829 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 GNRH1P01148 92 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 PBX2P40425 430 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 CRHR2Q13324 411 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 PDAP1Q13442 181 aaKnown RBP8.12□□□□□ -1.11
TVP23B-210ENST00000582288 SLC9C1Q4G0N8 1177 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 ANKRD18AQ8IVF6 992 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 SLC17A8Q8NDX2 589 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 CD99L2Q8TCZ2 262 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 COA1Q9GZY4 146 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 DEFB129Q9H1M3 183 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 HYPKQ9NX55 129 aa8.12□□□□□ -1.11
TVP23B-210ENST00000582288 RANBP2P49792 3224 aaKnown RBP8.12□□□□□ -1.11
TVP23B-210ENST00000582288 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
TVP23B-210ENST00000582288 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
TVP23B-210ENST00000582288 ATP5J2-PTCD1G3V325 749 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 CHL1O00533 1208 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 CHRM1P11229 460 aaPredicted RBP8.11□□□□□ -1.11
TVP23B-210ENST00000582288 PRMT2P55345 433 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 CNGB1Q14028 1251 aaPredicted RBP8.11□□□□□ -1.11
TVP23B-210ENST00000582288 SUPT20HL1Q3ZLR7 823 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 CCDC191Q8NCU4 936 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 PRO3102Q9H379 93 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 SEC31BQ9NQW1 1179 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 CHPF2Q9P2E5 772 aa8.11□□□□□ -1.11
TVP23B-210ENST00000582288 SCAF8Q9UPN6 1271 aaKnown RBP8.11□□□□□ -1.11
TVP23B-210ENST00000582288 SASH1O94885 1247 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 PCCAP05165 728 aaPredicted RBP8.1□□□□□ -1.11
TVP23B-210ENST00000582288 CAPN2P17655 700 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 RIPK4P57078 832 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 SLC4A8Q2Y0W8 1093 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 HDGFL1Q5TGJ6 251 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 ANKRD13AQ8IZ07 590 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 CDC5LQ99459 802 aaKnown RBP8.1□□□□□ -1.11
TVP23B-210ENST00000582288 PTPN18Q99952 460 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 PCGF6Q9BYE7 350 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 ZCCHC17Q9NP64 241 aaKnown RBP8.1□□□□□ -1.11
TVP23B-210ENST00000582288 BSDC1Q9NW68 430 aaPredicted RBP8.1□□□□□ -1.11
TVP23B-210ENST00000582288 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
TVP23B-210ENST00000582288 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
TVP23B-210ENST00000582288 ZNF804BA4D1E1 1349 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
TVP23B-210ENST00000582288 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
TVP23B-210ENST00000582288 PRKG1Q13976 671 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 SSC5DA1L4H1 1573 aa8.09□□□□□ -1.11
TVP23B-210ENST00000582288 MYO1BO43795 1136 aa8.08□□□□□ -1.12
TVP23B-210ENST00000582288 WDHD1O75717 1129 aaPredicted RBP8.08□□□□□ -1.12
TVP23B-210ENST00000582288 TMPOP42166 694 aaKnown RBP8.08□□□□□ -1.12
TVP23B-210ENST00000582288 FKBP1AP62942 108 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms