RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 MYLIPQ8WY64 445 aa12.57□□□□□ -0.4
CTC1-208ENST00000581671 DEFB118Q96PH6 123 aa12.57□□□□□ -0.4
CTC1-208ENST00000581671 ELP3Q9H9T3 547 aa12.57□□□□□ -0.4
CTC1-208ENST00000581671 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
CTC1-208ENST00000581671 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
CTC1-208ENST00000581671 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
CTC1-208ENST00000581671 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
CTC1-208ENST00000581671 WDHD1O75717 1129 aaPredicted RBP12.56□□□□□ -0.4
CTC1-208ENST00000581671 CAPN2P17655 700 aa12.56□□□□□ -0.4
CTC1-208ENST00000581671 HOXD10P28358 340 aa12.56□□□□□ -0.4
CTC1-208ENST00000581671 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
CTC1-208ENST00000581671 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
CTC1-208ENST00000581671 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
CTC1-208ENST00000581671 GTF2A2P52657 109 aa12.55□□□□□ -0.4
CTC1-208ENST00000581671 PODNQ7Z5L7 613 aa12.55□□□□□ -0.4
CTC1-208ENST00000581671 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
CTC1-208ENST00000581671 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
CTC1-208ENST00000581671 ZBED3Q96IU2 234 aaPredicted RBP12.55□□□□□ -0.4
CTC1-208ENST00000581671 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
CTC1-208ENST00000581671 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
CTC1-208ENST00000581671 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
CTC1-208ENST00000581671 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
CTC1-208ENST00000581671 SUPT20HL1Q3ZLR7 823 aa12.54□□□□□ -0.4
CTC1-208ENST00000581671 DACT2Q5SW24 774 aa12.54□□□□□ -0.4
CTC1-208ENST00000581671 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
CTC1-208ENST00000581671 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
CTC1-208ENST00000581671 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
CTC1-208ENST00000581671 GGA1Q9UJY5 639 aa12.54□□□□□ -0.4
CTC1-208ENST00000581671 FOSL2P15408 326 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CTC1-208ENST00000581671 C17orf99Q6UX52 265 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 MCM10Q7L590 875 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
CTC1-208ENST00000581671 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 PPP2R3BQ9Y5P8 575 aa12.53□□□□□ -0.4
CTC1-208ENST00000581671 RPS8P62241 208 aaKnown RBP12.52□□□□□ -0.41
CTC1-208ENST00000581671 PRKCZQ05513 592 aa12.52□□□□□ -0.41
CTC1-208ENST00000581671 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
CTC1-208ENST00000581671 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
CTC1-208ENST00000581671 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.41
CTC1-208ENST00000581671 PAK6Q9NQU5 681 aaPredicted RBP12.52□□□□□ -0.41
CTC1-208ENST00000581671 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
CTC1-208ENST00000581671 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
CTC1-208ENST00000581671 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 ZCCHC17Q9NP64 241 aaKnown RBP12.51□□□□□ -0.41
CTC1-208ENST00000581671 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 ADGRA2Q96PE1 1338 aa12.51□□□□□ -0.41
CTC1-208ENST00000581671 INHAP05111 366 aa12.5□□□□□ -0.41
CTC1-208ENST00000581671 MMP14P50281 582 aa12.5□□□□□ -0.41
CTC1-208ENST00000581671 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
CTC1-208ENST00000581671 ADAMTS19Q8TE59 1207 aa12.5□□□□□ -0.41
CTC1-208ENST00000581671 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
CTC1-208ENST00000581671 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
CTC1-208ENST00000581671 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
CTC1-208ENST00000581671 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
CTC1-208ENST00000581671 MGAMO43451 1857 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 ECM29Q5VYK3 1845 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
CTC1-208ENST00000581671 ADCY3O60266 1144 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 ELNP15502 786 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
CTC1-208ENST00000581671 NBPF3Q9H094 633 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 GABRQQ9UN88 632 aa12.49□□□□□ -0.41
CTC1-208ENST00000581671 CETPP11597 493 aa12.48□□□□□ -0.41
CTC1-208ENST00000581671 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
CTC1-208ENST00000581671 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
CTC1-208ENST00000581671 UHRF1Q96T88 793 aaPredicted RBP12.48□□□□□ -0.41
CTC1-208ENST00000581671 VGLL4Q14135 290 aa12.47□□□□□ -0.41
CTC1-208ENST00000581671 LRFN3Q9BTN0 628 aa12.47□□□□□ -0.41
CTC1-208ENST00000581671 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
CTC1-208ENST00000581671 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
CTC1-208ENST00000581671 CLRN2A0PK11 232 aa12.46□□□□□ -0.41
CTC1-208ENST00000581671 DLGAP5Q15398 846 aa12.46□□□□□ -0.41
CTC1-208ENST00000581671 ATXN2LQ8WWM7 1075 aaKnown RBP12.46□□□□□ -0.41
CTC1-208ENST00000581671 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
CTC1-208ENST00000581671 P2RX7Q99572 595 aaKnown RBP12.46□□□□□ -0.41
CTC1-208ENST00000581671 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
CTC1-208ENST00000581671 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
CTC1-208ENST00000581671 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
CTC1-208ENST00000581671 XDHP47989 1333 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 FCGRTP55899 365 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
CTC1-208ENST00000581671 RASA3Q14644 834 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 ASB2Q96Q27 587 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 VEZTQ9HBM0 779 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 DOCK3Q8IZD9 2030 aa12.45□□□□□ -0.42
CTC1-208ENST00000581671 SPDYE5A6NIY4 337 aa12.44□□□□□ -0.42
CTC1-208ENST00000581671 ATP2B4P23634 1241 aa12.44□□□□□ -0.42
CTC1-208ENST00000581671 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms