RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 COL4A1P02462 1669 aa8.75□□□□□ -1.01
DDX42-213ENST00000581477 TAF1P21675 1872 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 APBB1O00213 710 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 BBOX1O75936 387 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 SRGNP10124 158 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 NPR1P16066 1061 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 IGHMBP2P38935 993 aaKnown RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 TFCP2Q12800 502 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 GRAPQ13588 217 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 CLASRPQ8N2M8 674 aaKnown RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 VGLL2Q8N8G2 317 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 GRAPLQ8TC17 118 aaPredicted RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 EAF2Q96CJ1 260 aaPredicted RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 RBM17Q96I25 401 aaKnown RBP8.74□□□□□ -1.01
DDX42-213ENST00000581477 MPHOSPH8Q99549 860 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 STAP2Q9UGK3 403 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 KIF13BQ9NQT8 1826 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 MROH5Q6ZUA9 1318 aa8.74□□□□□ -1.01
DDX42-213ENST00000581477 C10orf71Q711Q0 1435 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 PDE8BO95263 885 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 PDE1AP54750 535 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 TNNI3KQ59H18 835 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 TMC4Q7Z404 712 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 SKAP1Q86WV1 359 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 C16orf71Q8IYS4 520 aaPredicted RBP8.73□□□□□ -1.01
DDX42-213ENST00000581477 RPGRQ92834 1020 aaKnown RBP8.73□□□□□ -1.01
DDX42-213ENST00000581477 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
DDX42-213ENST00000581477 MASTLQ96GX5 879 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 IL1RAPL2Q9NP60 686 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 CNNM1Q9NRU3 951 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 AKAP2Q9Y2D5 859 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 FPGT-TNNI3KV9GXZ4 949 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 AOX1Q06278 1338 aa8.73□□□□□ -1.01
DDX42-213ENST00000581477 H0YIN7 160 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 FGFR2P21802 821 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 PTPREP23469 700 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 POLD1P28340 1107 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 ALDH1B1P30837 517 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 RGS3P49796 1198 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 STYK1Q6J9G0 422 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
DDX42-213ENST00000581477 MINPP1Q9UNW1 487 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
DDX42-213ENST00000581477 SPEF2Q9C093 1822 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 TTC41PQ6P2S7 1318 aa8.72□□□□□ -1.01
DDX42-213ENST00000581477 COL11A2P13942 1736 aaPredicted RBP8.71□□□□□ -1.01
DDX42-213ENST00000581477 A0A1B0GUL6 1792 aa8.71□□□□□ -1.01
DDX42-213ENST00000581477 IFIT2P09913 472 aaKnown RBP8.71□□□□□ -1.02
DDX42-213ENST00000581477 MX1P20591 662 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 TGFB2P61812 414 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 CHRNDQ07001 517 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 METTL24Q5JXM2 366 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 AACSQ86V21 672 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 C2CD5Q86YS7 1000 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 SP8Q8IXZ3 490 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 DLEC1Q9Y238 1755 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 ZNF609O15014 1411 aa8.71□□□□□ -1.02
DDX42-213ENST00000581477 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 KCNA3P22001 575 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 TIMM10P62072 90 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 UBE4AQ14139 1066 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 PUM3Q15397 648 aaKnown RBP8.7□□□□□ -1.02
DDX42-213ENST00000581477 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 BMP2KLQ5H9B9 411 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 LCE2AQ5TA79 106 aaPredicted RBP8.7□□□□□ -1.02
DDX42-213ENST00000581477 PI4K2BQ8TCG2 481 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 LPIN2Q92539 896 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 CNKSR1Q969H4 720 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 ECHDC1Q9NTX5 307 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.7□□□□□ -1.02
DDX42-213ENST00000581477 DBNLQ9UJU6 430 aaKnown RBP8.7□□□□□ -1.02
DDX42-213ENST00000581477 CD2APQ9Y5K6 639 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 LRRC37AA6NMS7 1700 aa8.7□□□□□ -1.02
DDX42-213ENST00000581477 ARAP2Q8WZ64 1704 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 KIAA1551Q9HCM1 1747 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 TAF5LO75529 589 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 ATP5JP18859 108 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 TTC22Q5TAA0 569 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 C15orf52Q6ZUT6 534 aaKnown RBP8.69□□□□□ -1.02
DDX42-213ENST00000581477 HELBQ8NG08 1087 aaPredicted RBP8.69□□□□□ -1.02
DDX42-213ENST00000581477 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 ZNF512BQ96KM6 892 aaPredicted RBP8.69□□□□□ -1.02
DDX42-213ENST00000581477 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 CCDC8Q9H0W5 538 aaPredicted RBP8.69□□□□□ -1.02
DDX42-213ENST00000581477 SPON1Q9HCB6 807 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 TLR7Q9NYK1 1049 aaKnown RBP8.69□□□□□ -1.02
DDX42-213ENST00000581477 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 ATP6V0A2Q9Y487 856 aa8.69□□□□□ -1.02
DDX42-213ENST00000581477 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
DDX42-213ENST00000581477 PPEF1O14829 653 aaPredicted RBP8.68□□□□□ -1.02
DDX42-213ENST00000581477 ERC2O15083 957 aa8.68□□□□□ -1.02
DDX42-213ENST00000581477 GLRX3O76003 335 aaKnown RBP8.68□□□□□ -1.02
DDX42-213ENST00000581477 IFIT1P09914 478 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms