RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 RAB3IPQ96QF0 476 aaPredicted RBP4.88□□□□□ -1.63
RTTN-206ENST00000581161 ZFYVE1Q9HBF4 777 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 SWAP70Q9UH65 585 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 TTC21AQ8NDW8 1320 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 CEP57L1Q8IYX8 460 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 KIAA1524Q8TCG1 905 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 C9orf78Q9NZ63 289 aaPredicted RBP4.88□□□□□ -1.63
RTTN-206ENST00000581161 FEZ2Q9UHY8 353 aaPredicted RBP4.88□□□□□ -1.63
RTTN-206ENST00000581161 RPAP1Q9BWH6 1393 aaPredicted RBP4.88□□□□□ -1.63
RTTN-206ENST00000581161 RAD50Q92878 1312 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 STMN1P16949 149 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 TYRO3Q06418 890 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 DNAJC25Q9H1X3 360 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 PHAXQ9H814 394 aaKnown RBP4.88□□□□□ -1.63
RTTN-206ENST00000581161 DACT1Q9NYF0 836 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 DUOX1Q9NRD9 1551 aa4.88□□□□□ -1.63
RTTN-206ENST00000581161 GMNNO75496 209 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 ARL1P40616 181 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 MTX1Q13505 466 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 KIF4BQ2VIQ3 1234 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TTC5Q8N0Z6 440 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 USHBP1Q8N6Y0 703 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 RBM28Q9NW13 759 aaKnown RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 AMOTL2Q9Y2J4 779 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 LRMPQ12912 555 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 FILIP1Q7Z7B0 1213 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 DDX11Q96FC9 970 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 COL5A2P05997 1499 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 GCOM1H8Y6P7 765 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 SGSM2O43147 1006 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 PPFIA3O75145 1194 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 RAB11FIP3O75154 756 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 MYCNP04198 464 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 MYZAPP0CAP1 466 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 SETSIPP0DME0 302 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 PSMA5P28066 241 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 CUL4BQ13620 913 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 DHX8Q14562 1220 aaKnown RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 UTP14CQ5TAP6 766 aaKnown RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 GBP6Q6ZN66 633 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TTC16Q8NEE8 873 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 KAZALD1Q96I82 304 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 SIL1Q9H173 461 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TAOK3Q9H2K8 898 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 KCNF1Q9H3M0 494 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 CFAP45Q9UL16 551 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 POLR3GO15318 223 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 ANXA1P04083 346 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 MAPK8IP2Q13387 824 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 CCDC174Q6PII3 467 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 ANKLE2Q86XL3 938 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 KIF1BPQ96EK5 621 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 SH2B1Q9NRF2 756 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 GIMAP4Q9NUV9 329 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TRMT1Q9NXH9 659 aaKnown RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 KDM6AO15550 1401 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 TIAM2Q8IVF5 1701 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TTC21BQ7Z4L5 1316 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 TAF7Q15545 349 aaPredicted RBP4.87□□□□□ -1.63
RTTN-206ENST00000581161 C1orf141Q5JVX7 400 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 CDC37L1Q7L3B6 337 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 WDR66Q8TBY9 1149 aa4.87□□□□□ -1.63
RTTN-206ENST00000581161 EIF3DO15371 548 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTTN-206ENST00000581161 KIF4AO95239 1232 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 G3BP1Q13283 466 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTTN-206ENST00000581161 PPFIBP2Q8ND30 876 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 LSG1Q9H089 658 aaKnown RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 MTMR6Q9Y217 621 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ACEP12821 1306 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 DLEC1Q9Y238 1755 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 GNAT3A8MTJ3 354 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 PTH1RQ03431 593 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 STIM1Q13586 685 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 CCDC110Q8TBZ0 833 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ZHX3Q9H4I2 956 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 NRBP1Q9UHY1 535 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 LTBP4Q8N2S1 1624 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 AIMP1Q12904 312 aaKnown RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 ADCK5Q3MIX3 580 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 CCDC73Q6ZRK6 1079 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 DDX12PQ92771 950 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 CBX8Q9HC52 389 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ITM2BQ9Y287 266 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 MAP3K19Q56UN5 1328 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 AK9Q5TCS8 1911 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ZNF165P49910 485 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 WDR78Q5VTH9 848 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 BLOC1S2Q6QNY1 142 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ZNF354CQ86Y25 554 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 CCDC8Q9H0W5 538 aaPredicted RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 OGFRQ9NZT2 677 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 MRVI1Q9Y6F6 885 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 SMTNL1A8MU46 457 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 AP5Z1O43299 807 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 GLRX3O76003 335 aaKnown RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 SMC2O95347 1197 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 ZSCAN20P17040 1043 aaPredicted RBP4.86□□□□□ -1.63
RTTN-206ENST00000581161 LIG1P18858 919 aa4.86□□□□□ -1.63
RTTN-206ENST00000581161 PDCP20941 246 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms