RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 ITPKAP23677 461 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 ZNF157P51786 506 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 SNRPNP63162 240 aaKnown RBP11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
TRAPPC8-208ENST00000581057 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 BAG6P46379 1132 aa11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 VN1R5Q7Z5H4 357 aa11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 CACTIN-AS1Q8N1I8 211 aa11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 PPME1Q9Y570 386 aa11.11□□□□□ -0.63
TRAPPC8-208ENST00000581057 NID1P14543 1247 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 LORP23490 312 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 VAMP1P23763 118 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 INSM1Q01101 510 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 PCDH1Q08174 1060 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 CLEC4MQ9H2X3 399 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 PRDM6Q9NQX0 595 aa11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 GPN3Q9UHW5 284 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-208ENST00000581057 IKBKEQ14164 716 aa11.09□□□□□ -0.63
TRAPPC8-208ENST00000581057 TAF1CQ15572 869 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC8-208ENST00000581057 FAM117BQ6P1L5 589 aa11.09□□□□□ -0.63
TRAPPC8-208ENST00000581057 ZFYVE1Q9HBF4 777 aa11.09□□□□□ -0.63
TRAPPC8-208ENST00000581057 H3BRJ5 948 aa11.08□□□□□ -0.64
TRAPPC8-208ENST00000581057 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-208ENST00000581057 COL9A3Q14050 684 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC8-208ENST00000581057 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
TRAPPC8-208ENST00000581057 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
TRAPPC8-208ENST00000581057 CARD10Q9BWT7 1032 aa11.07□□□□□ -0.64
TRAPPC8-208ENST00000581057 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
TRAPPC8-208ENST00000581057 SOX1O00570 391 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 LINC00114Q6XXX2 140 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 PODNQ7Z5L7 613 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 TRIM11Q96F44 468 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 PLVAPQ9BX97 442 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 SEC31BQ9NQW1 1179 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 PPM1HQ9ULR3 514 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
TRAPPC8-208ENST00000581057 USP31Q70CQ4 1352 aa11.05□□□□□ -0.64
TRAPPC8-208ENST00000581057 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC8-208ENST00000581057 CNTNAP5Q8WYK1 1306 aa11.05□□□□□ -0.64
TRAPPC8-208ENST00000581057 GNB5O14775 395 aa11.04□□□□□ -0.64
TRAPPC8-208ENST00000581057 FSCN2O14926 492 aa11.04□□□□□ -0.64
TRAPPC8-208ENST00000581057 ARL4DP49703 201 aa11.04□□□□□ -0.64
TRAPPC8-208ENST00000581057 RPS26P11Q5JNZ5 115 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-208ENST00000581057 FAM229AH3BQW9 127 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 SCAMP3O14828 347 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 GSTM4Q03013 218 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 CEP44Q9C0F1 390 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 TMEM39AQ9NV64 488 aa11.03□□□□□ -0.64
TRAPPC8-208ENST00000581057 PIK3R2O00459 728 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 B3GALT4O96024 378 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 CELA3AP09093 270 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 SETDB1Q15047 1291 aa11.02□□□□□ -0.65
TRAPPC8-208ENST00000581057 ZNF76P36508 570 aa11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 RAC1P63000 192 aa11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 C19orf57Q0VDD7 668 aa11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 KLHDC7BQ96G42 594 aa11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 TRIM56Q9BRZ2 755 aaKnown RBP11.01□□□□□ -0.65
TRAPPC8-208ENST00000581057 A0A0A0MRY4 1105 aa11□□□□□ -0.65
TRAPPC8-208ENST00000581057 F6X3S4 739 aa11□□□□□ -0.65
TRAPPC8-208ENST00000581057 TCF3P15923 654 aa11□□□□□ -0.65
TRAPPC8-208ENST00000581057 TRIM28Q13263 835 aaKnown RBP11□□□□□ -0.65
TRAPPC8-208ENST00000581057 GALNT11Q8NCW6 608 aa11□□□□□ -0.65
TRAPPC8-208ENST00000581057 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 ENC1O14682 589 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 FANCCQ00597 558 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 DDX54Q8TDD1 881 aaKnown RBP10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 RNF34Q969K3 372 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 GGT7Q9UJ14 662 aa10.99□□□□□ -0.65
TRAPPC8-208ENST00000581057 PAGE1O75459 146 aa10.98□□□□□ -0.65
TRAPPC8-208ENST00000581057 NLRP12P59046 1061 aa10.98□□□□□ -0.65
TRAPPC8-208ENST00000581057 KLHL23Q8NBE8 558 aa10.98□□□□□ -0.65
TRAPPC8-208ENST00000581057 WNT8BQ93098 351 aa10.98□□□□□ -0.65
TRAPPC8-208ENST00000581057 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
TRAPPC8-208ENST00000581057 DDX3YO15523 660 aaKnown RBP10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 ILDR2Q71H61 639 aa10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 HS2ST1Q7LGA3 356 aa10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 MAP4K3Q8IVH8 894 aa10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 DTWD1Q8N5C7 304 aa10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 SCARF2Q96GP6 870 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC8-208ENST00000581057 CBX8Q9HC52 389 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms