RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 SCARF1Q14162 830 aa16.47■□□□□ 0.23
NUP85-215ENST00000580879 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
NUP85-215ENST00000580879 OGFOD1Q8N543 542 aa16.47■□□□□ 0.23
NUP85-215ENST00000580879 LPIN2Q92539 896 aa16.47■□□□□ 0.23
NUP85-215ENST00000580879 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
NUP85-215ENST00000580879 SASH1O94885 1247 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 TFCP2Q12800 502 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 POLA2Q14181 598 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 GGA3Q9NZ52 723 aa16.46■□□□□ 0.23
NUP85-215ENST00000580879 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.46■□□□□ 0.23
NUP85-215ENST00000580879 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 ADM5C9JUS6 153 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 ADORA1P30542 326 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
NUP85-215ENST00000580879 DNAJC5GQ8N7S2 189 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 DCPSQ96C86 337 aaKnown RBP16.45■□□□□ 0.22
NUP85-215ENST00000580879 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
NUP85-215ENST00000580879 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
NUP85-215ENST00000580879 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 TIMM10P62072 90 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
NUP85-215ENST00000580879 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
NUP85-215ENST00000580879 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
NUP85-215ENST00000580879 GRIK5Q16478 980 aa16.43■□□□□ 0.22
NUP85-215ENST00000580879 MKRN1Q9UHC7 482 aaKnown RBP16.43■□□□□ 0.22
NUP85-215ENST00000580879 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
NUP85-215ENST00000580879 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 WNT10BO00744 389 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
NUP85-215ENST00000580879 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
NUP85-215ENST00000580879 PHKA1P46020 1223 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
NUP85-215ENST00000580879 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
NUP85-215ENST00000580879 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 CST9Q5W186 159 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
NUP85-215ENST00000580879 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
NUP85-215ENST00000580879 NEUROD6Q96NK8 337 aa16.41■□□□□ 0.22
NUP85-215ENST00000580879 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
NUP85-215ENST00000580879 ABT1Q9ULW3 272 aaKnown RBP16.41■□□□□ 0.22
NUP85-215ENST00000580879 TTF2Q9UNY4 1162 aaKnown RBP16.41■□□□□ 0.22
NUP85-215ENST00000580879 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
NUP85-215ENST00000580879 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP85-215ENST00000580879 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
NUP85-215ENST00000580879 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
NUP85-215ENST00000580879 XAGE2Q96GT9 111 aa16.4■□□□□ 0.22
NUP85-215ENST00000580879 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
NUP85-215ENST00000580879 AKAP2Q9Y2D5 859 aa16.4■□□□□ 0.22
NUP85-215ENST00000580879 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
NUP85-215ENST00000580879 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
NUP85-215ENST00000580879 GNL3LQ9NVN8 582 aaKnown RBP16.39■□□□□ 0.21
NUP85-215ENST00000580879 AOX1Q06278 1338 aa16.39■□□□□ 0.21
NUP85-215ENST00000580879 MMP14P50281 582 aa16.38■□□□□ 0.21
NUP85-215ENST00000580879 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
NUP85-215ENST00000580879 PRAMEF18Q5VWM3 479 aa16.38■□□□□ 0.21
NUP85-215ENST00000580879 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
NUP85-215ENST00000580879 CDCA5Q96FF9 252 aa16.38■□□□□ 0.21
NUP85-215ENST00000580879 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
NUP85-215ENST00000580879 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
NUP85-215ENST00000580879 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
NUP85-215ENST00000580879 CLRN2A0PK11 232 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 PITPNM2Q9BZ72 1349 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
NUP85-215ENST00000580879 TRPM7Q96QT4 1865 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 CRKP46108 304 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 TNNI3KQ59H18 835 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
NUP85-215ENST00000580879 MTMR14Q8NCE2 650 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 WDR66Q8TBY9 1149 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
NUP85-215ENST00000580879 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 FPGT-TNNI3KV9GXZ4 949 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
NUP85-215ENST00000580879 PCNTO95613 3336 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 APBB1O00213 710 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 VEGFBP49765 207 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 GRM1Q13255 1194 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 RPAP2Q8IXW5 612 aaPredicted RBP16.35■□□□□ 0.21
NUP85-215ENST00000580879 VEZTQ9HBM0 779 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 DENND2AQ9ULE3 1009 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 TLL2Q9Y6L7 1015 aa16.35■□□□□ 0.21
NUP85-215ENST00000580879 SEMA3EO15041 775 aa16.34■□□□□ 0.21
NUP85-215ENST00000580879 PRDX5P30044 214 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms