RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CFAP70Q5T0N1 1121 aa7.03□□□□□ -1.28
SMG8-205ENST00000580798 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
SMG8-205ENST00000580798 TMPRSS13Q9BYE2 586 aa7.03□□□□□ -1.28
SMG8-205ENST00000580798 SALL4Q9UJQ4 1053 aa7.03□□□□□ -1.28
SMG8-205ENST00000580798 ACIN1Q9UKV3 1341 aaKnown RBP7.02□□□□□ -1.28
SMG8-205ENST00000580798 FAM95CA0A1B0GW59 222 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 TIAF1O95411 115 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 RFX1P22670 979 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 C19orf57Q0VDD7 668 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 NAA30Q147X3 362 aaPredicted RBP7.02□□□□□ -1.29
SMG8-205ENST00000580798 NFKBIBQ15653 356 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 NUTM2GQ5VZR2 741 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 HHIPQ96QV1 700 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 BSDC1Q9NW68 430 aaPredicted RBP7.02□□□□□ -1.29
SMG8-205ENST00000580798 CNTN3Q9P232 1028 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 SOX13Q9UN79 622 aa7.02□□□□□ -1.29
SMG8-205ENST00000580798 CYP26A1O43174 497 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 TRPA1O75762 1119 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 ADMP35318 185 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 ARL4DP49703 201 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 PDE12Q6L8Q7 609 aaKnown RBP7.01□□□□□ -1.29
SMG8-205ENST00000580798 SMG8Q8ND04 991 aaKnown RBP7.01□□□□□ -1.29
SMG8-205ENST00000580798 METTL22Q9BUU2 404 aaPredicted RBP7.01□□□□□ -1.29
SMG8-205ENST00000580798 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
SMG8-205ENST00000580798 PDE2AO00408 941 aaPredicted RBP7□□□□□ -1.29
SMG8-205ENST00000580798 FAM69CQ0P6D2 419 aa7□□□□□ -1.29
SMG8-205ENST00000580798 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
SMG8-205ENST00000580798 PAOXQ6QHF9 649 aa7□□□□□ -1.29
SMG8-205ENST00000580798 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
SMG8-205ENST00000580798 CYP4F12Q9HCS2 524 aa7□□□□□ -1.29
SMG8-205ENST00000580798 PAK6Q9NQU5 681 aaPredicted RBP7□□□□□ -1.29
SMG8-205ENST00000580798 STIM2Q9P246 746 aa7□□□□□ -1.29
SMG8-205ENST00000580798 ZNF777Q9ULD5 760 aaPredicted RBP7□□□□□ -1.29
SMG8-205ENST00000580798 LOC100289279A0A1B0GTE1 492 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 DLGAP3O95886 979 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 DRD2P14416 443 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 ZNF438Q7Z4V0 828 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 ZAR1Q86SH2 424 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 FLCNQ8NFG4 579 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 TBC1D32Q96NH3 1257 aa6.99□□□□□ -1.29
SMG8-205ENST00000580798 SOX1O00570 391 aaPredicted RBP6.98□□□□□ -1.29
SMG8-205ENST00000580798 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 AGBL5Q8NDL9 886 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 NUDT16Q96DE0 195 aaKnown RBP6.98□□□□□ -1.29
SMG8-205ENST00000580798 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
SMG8-205ENST00000580798 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 ZMIZ1Q9ULJ6 1067 aa6.98□□□□□ -1.29
SMG8-205ENST00000580798 FAM170BA6NMN3 283 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 PAPLNO95428 1278 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 CES1P23141 567 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 USP11P51784 963 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
SMG8-205ENST00000580798 ABTB2Q8N961 1025 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 C2CD4AQ8NCU7 369 aaPredicted RBP6.97□□□□□ -1.29
SMG8-205ENST00000580798 GATA6Q92908 595 aa6.97□□□□□ -1.29
SMG8-205ENST00000580798 IKBKEQ14164 716 aa6.96□□□□□ -1.3
SMG8-205ENST00000580798 EXOSC6Q5RKV6 272 aaKnown RBP6.96□□□□□ -1.3
SMG8-205ENST00000580798 VN1R5Q7Z5H4 357 aa6.96□□□□□ -1.3
SMG8-205ENST00000580798 TMEM102Q8N9M5 508 aaPredicted RBP6.96□□□□□ -1.3
SMG8-205ENST00000580798 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
SMG8-205ENST00000580798 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
SMG8-205ENST00000580798 ZNF124Q15973 351 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 ATCAYQ86WG3 371 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 STK32AQ8WU08 396 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 BSNDQ8WZ55 320 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 NXPE3Q969Y0 559 aa6.95□□□□□ -1.3
SMG8-205ENST00000580798 SOX4Q06945 474 aaPredicted RBP6.94□□□□□ -1.3
SMG8-205ENST00000580798 CHRDQ9H2X0 955 aa6.94□□□□□ -1.3
SMG8-205ENST00000580798 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
SMG8-205ENST00000580798 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
SMG8-205ENST00000580798 ELOAQ14241 798 aaKnown RBP6.93□□□□□ -1.3
SMG8-205ENST00000580798 FBLN7Q53RD9 439 aa6.93□□□□□ -1.3
SMG8-205ENST00000580798 SOX17Q9H6I2 414 aaPredicted RBP6.93□□□□□ -1.3
SMG8-205ENST00000580798 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
SMG8-205ENST00000580798 DBX1A6NMT0 343 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 DUSP27Q5VZP5 1158 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 SPOCD1Q6ZMY3 1216 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 WFDC3Q8IUB2 231 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 OSMRQ99650 979 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 ZKSCAN3Q9BRR0 538 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 GGNBP2Q9H3C7 697 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 LRRC4CQ9HCJ2 640 aa6.92□□□□□ -1.3
SMG8-205ENST00000580798 A6NHS1 94 aa6.91□□□□□ -1.3
SMG8-205ENST00000580798 ESRRAP11474 423 aaPredicted RBP6.91□□□□□ -1.3
SMG8-205ENST00000580798 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
SMG8-205ENST00000580798 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
SMG8-205ENST00000580798 EDEM1Q92611 657 aa6.91□□□□□ -1.3
SMG8-205ENST00000580798 RPLP1P05386 114 aaKnown RBP6.9□□□□□ -1.3
SMG8-205ENST00000580798 NFICP08651 508 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 ADH5P11766 374 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 BCL7CQ8WUZ0 217 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms