RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
CPD-204ENST00000580396 ALS2Q96Q42 1657 aa10.77□□□□□ -0.68
CPD-204ENST00000580396 LRMPQ12912 555 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 STX1AQ16623 288 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 DHX32Q7L7V1 743 aaKnown RBP10.77□□□□□ -0.69
CPD-204ENST00000580396 NSUN7Q8NE18 718 aaKnown RBP10.77□□□□□ -0.69
CPD-204ENST00000580396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.692e-6■■□□□ 13.9
CPD-204ENST00000580396 NRBP1Q9UHY1 535 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 PAXBP1Q9Y5B6 917 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 LOC102724159A0A0B4J2E5 919 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 TRIM66O15016 1216 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 SLC39A6Q13433 755 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 PWP2Q15269 919 aaKnown RBP10.77□□□□□ -0.69
CPD-204ENST00000580396 CHMP4CQ96CF2 233 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 DBNDD2Q9BQY9 259 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 DSCC1Q9BVC3 393 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.69
CPD-204ENST00000580396 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 GOLGA6L19H0YKK7 550 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 SNRPA1P09661 255 aaKnown RBP10.76□□□□□ -0.69
CPD-204ENST00000580396 PHKG2P15735 406 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 CCDC129Q6ZRS4 1044 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
CPD-204ENST00000580396 RAPGEF4Q8WZA2 1011 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 DNAJC2Q99543 621 aaKnown RBP10.76□□□□□ -0.69
CPD-204ENST00000580396 IGSF5Q9NSI5 407 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 SALL1Q9NSC2 1324 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 CASP7P55210 303 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 DMTNQ08495 405 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
CPD-204ENST00000580396 DDX11Q96FC9 970 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
CPD-204ENST00000580396 GPR108Q9NPR9 543 aa10.76□□□□□ -0.69
CPD-204ENST00000580396 ZSCAN20P17040 1043 aaPredicted RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 EXOSC10Q01780 885 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 UBE3BQ7Z3V4 1068 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 CCAR1Q8IX12 1150 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 JMYQ8N9B5 988 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 ORAI2Q96SN7 254 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 SEC62Q99442 399 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 PARP4Q9UKK3 1724 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 COL18A1P39060 1754 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 PTPDC1A2A3K4 754 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 CTDNEP1O95476 244 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 TNNT1P13805 278 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 SNW1Q13573 536 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 ATP2B3Q16720 1220 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 CCDC144BQ3MJ40 725 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 CNPY4Q8N129 248 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 ENGASEQ8NFI3 743 aa10.75□□□□□ -0.69
CPD-204ENST00000580396 C16orf45Q96MC5 204 aaPredicted RBP10.75□□□□□ -0.69
CPD-204ENST00000580396 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
CPD-204ENST00000580396 MCM6Q14566 821 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 C11orf57Q6ZUT1 292 aaPredicted RBP10.74□□□□□ -0.69
CPD-204ENST00000580396 LRRC8AQ8IWT6 810 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 ZNF274Q96GC6 653 aaPredicted RBP10.74□□□□□ -0.69
CPD-204ENST00000580396 FEZ1Q99689 392 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 TJP1Q07157 1748 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 MEGF6O75095 1541 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 TATP17735 454 aaPredicted RBP10.74□□□□□ -0.69
CPD-204ENST00000580396 ZMYM1Q5SVZ6 1142 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 PLBD2Q8NHP8 589 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 GTPBP4Q9BZE4 634 aaKnown RBP10.74□□□□□ -0.69
CPD-204ENST00000580396 GOLPH3LQ9H4A5 285 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 NDUFB9Q9Y6M9 179 aa10.74□□□□□ -0.69
CPD-204ENST00000580396 DDX60Q8IY21 1712 aaKnown RBP10.73□□□□□ -0.69
CPD-204ENST00000580396 BCL9O00512 1426 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 A0A087WZG4 1122 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
CPD-204ENST00000580396 FMNL2Q96PY5 1086 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 KCND1Q9NSA2 647 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 PAG1Q9NWQ8 432 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 WDR90Q96KV7 1748 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 MARCH6O60337 910 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 CHGBP05060 677 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 TPD52L1Q16890 204 aaPredicted RBP10.73□□□□□ -0.69
CPD-204ENST00000580396 KRT28Q7Z3Y7 464 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 TTC5Q8N0Z6 440 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 KIAA1522Q9P206 1035 aaPredicted RBP10.73□□□□□ -0.69
CPD-204ENST00000580396 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
CPD-204ENST00000580396 EVCP57679 992 aa10.72□□□□□ -0.69
CPD-204ENST00000580396 CBX1P83916 185 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms