RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 MAP3K11Q16584 847 aa4.4□□□□□ -1.71
CDH19-204ENST00000579658 DDX46Q7L014 1031 aaKnown RBP4.4□□□□□ -1.71
CDH19-204ENST00000579658 APOBEC3FQ8IUX4 373 aaKnown RBP4.4□□□□□ -1.71
CDH19-204ENST00000579658 GRAPLQ8TC17 118 aaPredicted RBP4.4□□□□□ -1.71
CDH19-204ENST00000579658 DPF3Q92784 378 aa4.4□□□□□ -1.71
CDH19-204ENST00000579658 ANP32EQ9BTT0 268 aa4.4□□□□□ -1.71
CDH19-204ENST00000579658 GZF1Q9H116 711 aaPredicted RBP4.4□□□□□ -1.71
CDH19-204ENST00000579658 ECM29Q5VYK3 1845 aa4.4□□□□□ -1.71
CDH19-204ENST00000579658 FAM205AQ6ZU69 1335 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 MYO3BQ8WXR4 1341 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 A6NJR5 290 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 BTBD11A6QL63 1104 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 YDJCA8MPS7 323 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 NTSR2O95665 410 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 BRD2P25440 801 aaKnown RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 PLA2G5P39877 138 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 KIF22Q14807 665 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 WDR43Q15061 677 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDH19-204ENST00000579658 WASHC4Q2M389 1173 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 LRIT3Q3SXY7 679 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 HSP90AB3PQ58FF7 597 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 LDLRAD1Q5T700 205 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDH19-204ENST00000579658 MIS18AQ9NYP9 233 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 SALL2Q9Y467 1007 aaPredicted RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 APAF1O14727 1248 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 HTATSF1O43719 755 aaKnown RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 TMPOP42166 694 aaKnown RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 SCARF1Q14162 830 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 TTLL12Q14166 644 aaPredicted RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 ANGEL2Q5VTE6 544 aaKnown RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 ZNF34Q8IZ26 560 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 POM121Q96HA1 1249 aa4.39□□□□□ -1.71
CDH19-204ENST00000579658 FARP1Q9Y4F1 1045 aaPredicted RBP4.39□□□□□ -1.71
CDH19-204ENST00000579658 RPTORQ8N122 1335 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 ECE2O60344 883 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 HSP90B1P14625 803 aaKnown RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 RIPK4P57078 832 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 NFE2L2Q16236 605 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 RSBN1LQ6PCB5 846 aaPredicted RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 KRI1Q8N9T8 703 aaKnown RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 RETREG2Q8NC44 543 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 HELBQ8NG08 1087 aaPredicted RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 CD99L2Q8TCZ2 262 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 FAM122AQ96E09 287 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 PKNOX2Q96KN3 472 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 UTP14AQ9BVJ6 771 aaKnown RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 TRIM35Q9UPQ4 493 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 UBE2Q2LH0YL09 131 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 GPR37O15354 613 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 HOXD10P28358 340 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 GIGYF2Q6Y7W6 1299 aaKnown RBP4.38□□□□□ -1.71
CDH19-204ENST00000579658 UBE2Q1Q7Z7E8 422 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 DEFB123Q8N688 67 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 RUNDC1Q96C34 613 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 WNK4Q96J92 1243 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 ZFYVE28Q9HCC9 887 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 MYOZ2Q9NPC6 264 aa4.38□□□□□ -1.71
CDH19-204ENST00000579658 FAM177BA6PVY3 158 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 G3V3G9 751 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 GJB1P08034 283 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 USP17L8P0C7I0 530 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 GJA8P48165 433 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 UBXN2AP68543 259 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 NUTM1Q86Y26 1132 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 SLC10A4Q96EP9 437 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 MTMR10Q9NXD2 777 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 USP16Q9Y5T5 823 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 RTL9Q8NET4 1388 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 SYNGAP1Q96PV0 1343 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 MAPK8IP3Q9UPT6 1336 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 NBPF26B4DH59 902 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 PPP1R12BO60237 982 aaPredicted RBP4.37□□□□□ -1.71
CDH19-204ENST00000579658 NEFLP07196 543 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 HLFQ16534 295 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 SUSD4Q5VX71 490 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 ERICH6BQ5W0A0 696 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 NBPF10Q6P3W6 841 aaKnown RBP4.37□□□□□ -1.71
CDH19-204ENST00000579658 ZC3H12CQ9C0D7 883 aaKnown RBP4.37□□□□□ -1.71
CDH19-204ENST00000579658 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
CDH19-204ENST00000579658 SHTN1A0MZ66 631 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 COL9A1P20849 921 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 IREB2P48200 963 aaKnown RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 FLIIQ13045 1269 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 KRT24Q2M2I5 525 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 GPIHBP1Q8IV16 184 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 TRIM47Q96LD4 638 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 RBM19Q9Y4C8 960 aaKnown RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 SCN9AQ15858 1988 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 UBN2Q6ZU65 1347 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 EVI5O60447 810 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 FARP2O94887 1054 aaPredicted RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 PIP4K2AP48426 406 aaPredicted RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 PTPN12Q05209 780 aaKnown RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 CRHR2Q13324 411 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 SUPT20HL1Q3ZLR7 823 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 TMCO4Q5TGY1 634 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 PODNQ7Z5L7 613 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 OGFOD1Q8N543 542 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 ANKLE1Q8NAG6 615 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms