RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 FRAT2O75474 233 aaPredicted RBP12.38□□□□□ -0.43
MKS1-208ENST00000579358 AAMPQ13685 434 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 TRPM4Q8TD43 1214 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 MXD3Q9BW11 206 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 GNL3LQ9NVN8 582 aaKnown RBP12.38□□□□□ -0.43
MKS1-208ENST00000579358 PGAP2Q9UHJ9 254 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
MKS1-208ENST00000579358 PSME4Q14997 1843 aa12.38□□□□□ -0.43
MKS1-208ENST00000579358 ADORA1P30542 326 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 PHKA1P46020 1223 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
MKS1-208ENST00000579358 TIMM10P62072 90 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
MKS1-208ENST00000579358 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 XAGE2Q96GT9 111 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 MYOZ2Q9NPC6 264 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
MKS1-208ENST00000579358 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
MKS1-208ENST00000579358 PDS5AQ29RF7 1337 aaKnown RBP12.37□□□□□ -0.43
MKS1-208ENST00000579358 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 EGFRP00533 1210 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 CHAF1AQ13111 956 aaPredicted RBP12.36□□□□□ -0.43
MKS1-208ENST00000579358 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 WDR66Q8TBY9 1149 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 DENND2AQ9ULE3 1009 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
MKS1-208ENST00000579358 SUGT1Q9Y2Z0 365 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
MKS1-208ENST00000579358 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
MKS1-208ENST00000579358 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
MKS1-208ENST00000579358 HSPA6P17066 643 aa12.35□□□□□ -0.43
MKS1-208ENST00000579358 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
MKS1-208ENST00000579358 MTMR14Q8NCE2 650 aa12.35□□□□□ -0.43
MKS1-208ENST00000579358 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
MKS1-208ENST00000579358 JAG2Q9Y219 1238 aa12.35□□□□□ -0.43
MKS1-208ENST00000579358 SALL1Q9NSC2 1324 aa12.35□□□□□ -0.43
MKS1-208ENST00000579358 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
MKS1-208ENST00000579358 ARID4AP29374 1257 aaPredicted RBP12.34□□□□□ -0.43
MKS1-208ENST00000579358 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 GORABQ5T7V8 394 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 MAST3O60307 1309 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
MKS1-208ENST00000579358 WNT10BO00744 389 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 UQCRFS1P1P0C7P4 283 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 HDLBPQ00341 1268 aaKnown RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 CCDC158Q5M9N0 1113 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 ZGPATQ8N5A5 531 aaKnown RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 ZBED3Q96IU2 234 aaPredicted RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 ZNF512BQ96KM6 892 aaPredicted RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 DBNDD2Q9BQY9 259 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 GGA3Q9NZ52 723 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 DBNLQ9UJU6 430 aaKnown RBP12.33□□□□□ -0.44
MKS1-208ENST00000579358 SERPINA10Q9UK55 444 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
MKS1-208ENST00000579358 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
MKS1-208ENST00000579358 APLP1P51693 650 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 SCARF1Q14162 830 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 DLGAP5Q15398 846 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
MKS1-208ENST00000579358 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
MKS1-208ENST00000579358 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
MKS1-208ENST00000579358 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 CFAP100Q494V2 611 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 TTC39AQ5SRH9 613 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
MKS1-208ENST00000579358 AACSQ86V21 672 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 LRRCC1Q9C099 1032 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 TLR7Q9NYK1 1049 aaKnown RBP12.31□□□□□ -0.44
MKS1-208ENST00000579358 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
MKS1-208ENST00000579358 APBB1O00213 710 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 MYO1BO43795 1136 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 IGSF3O75054 1194 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 LDHBP07195 334 aaKnown RBP12.3□□□□□ -0.44
MKS1-208ENST00000579358 PRDX5P30044 214 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 MCAMP43121 646 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 CRKP46108 304 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms