RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ZBTB48P10074 688 aaPredicted RBP10.91□□□□□ -0.66
CASC3-206ENST00000579238 FKBP1AP62942 108 aaKnown RBP10.91□□□□□ -0.66
CASC3-206ENST00000579238 CERS5Q8N5B7 392 aa10.91□□□□□ -0.66
CASC3-206ENST00000579238 SNAP23O00161 211 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 MYO1BO43795 1136 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 TAF5LO75529 589 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 IL1R1P14778 569 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
CASC3-206ENST00000579238 SUPT20HL1Q3ZLR7 823 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 CFAP100Q494V2 611 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
CASC3-206ENST00000579238 ZNF804AQ7Z570 1209 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 WNK4Q96J92 1243 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 FZD1Q9UP38 647 aa10.9□□□□□ -0.66
CASC3-206ENST00000579238 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 F8W031 263 aaPredicted RBP10.89□□□□□ -0.67
CASC3-206ENST00000579238 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 FOXO4P98177 505 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
CASC3-206ENST00000579238 CLMNQ96JQ2 1002 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 PCDHAC2Q9Y5I4 1007 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 SSC5DA1L4H1 1573 aa10.89□□□□□ -0.67
CASC3-206ENST00000579238 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 IGF2BP3O00425 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
CASC3-206ENST00000579238 VAMP4O75379 141 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
CASC3-206ENST00000579238 CCDC184Q52MB2 194 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 OTOP1Q7RTM1 612 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 PRMT6Q96LA8 375 aaPredicted RBP10.88□□□□□ -0.67
CASC3-206ENST00000579238 VEZTQ9HBM0 779 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
CASC3-206ENST00000579238 CHMP3Q9Y3E7 222 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 TRIM17Q9Y577 477 aa10.88□□□□□ -0.67
CASC3-206ENST00000579238 RASA3Q14644 834 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 BEND3Q5T5X7 828 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
CASC3-206ENST00000579238 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
CASC3-206ENST00000579238 OTUD7BQ6GQQ9 843 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 LMBR1LQ6UX01 489 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 LDHAL6AQ6ZMR3 332 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 ERO1AQ96HE7 468 aa10.87□□□□□ -0.67
CASC3-206ENST00000579238 CACNA1FO60840 1977 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 AOX1Q06278 1338 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 F6X3S4 739 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
CASC3-206ENST00000579238 GJA5P36382 358 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.671e-6■■■■□ 23.8
CASC3-206ENST00000579238 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 TAF7LQ5H9L4 462 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 WDR63Q8IWG1 891 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 GCC1Q96CN9 775 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 JAG2Q9Y219 1238 aa10.86□□□□□ -0.67
CASC3-206ENST00000579238 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
CASC3-206ENST00000579238 GRM8O00222 908 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 PLIN1O60240 522 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
CASC3-206ENST00000579238 CRHR2Q13324 411 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 EPHA10Q5JZY3 1008 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 TDRD7Q8NHU6 1098 aaKnown RBP10.85□□□□□ -0.67
CASC3-206ENST00000579238 ZNF594Q96JF6 807 aaPredicted RBP10.85□□□□□ -0.67
CASC3-206ENST00000579238 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 A0A1B0GUL6 1792 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 LAMB1P07942 1786 aa10.85□□□□□ -0.67
CASC3-206ENST00000579238 HTTP42858 3142 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 HIBADHP31937 336 aaKnown RBP10.84□□□□□ -0.67
CASC3-206ENST00000579238 SP3Q02447 781 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 MFSD14BQ5SR56 506 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 CD99L2Q8TCZ2 262 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 OPTNQ96CV9 577 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 PTPN18Q99952 460 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
CASC3-206ENST00000579238 ZNF70Q9UC06 446 aaPredicted RBP10.84□□□□□ -0.67
CASC3-206ENST00000579238 TTF2Q9UNY4 1162 aaKnown RBP10.84□□□□□ -0.67
CASC3-206ENST00000579238 MKI67P46013 3256 aaKnown RBP10.84□□□□□ -0.67
CASC3-206ENST00000579238 ALDH1L1O75891 902 aa10.83□□□□□ -0.68
CASC3-206ENST00000579238 DZIP1LQ8IYY4 767 aaKnown RBP10.83□□□□□ -0.68
CASC3-206ENST00000579238 ARMC5Q96C12 935 aa10.83□□□□□ -0.68
CASC3-206ENST00000579238 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
CASC3-206ENST00000579238 TDRD3Q9H7E2 651 aaKnown RBP10.83□□□□□ -0.68
CASC3-206ENST00000579238 ELP3Q9H9T3 547 aa10.83□□□□□ -0.68
CASC3-206ENST00000579238 C9orf78Q9NZ63 289 aaPredicted RBP10.83□□□□□ -0.68
CASC3-206ENST00000579238 CRKP46108 304 aa10.82□□□□□ -0.68
CASC3-206ENST00000579238 GYG1P46976 350 aa10.82□□□□□ -0.68
CASC3-206ENST00000579238 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
CASC3-206ENST00000579238 FAM84BQ96KN1 310 aaPredicted RBP10.82□□□□□ -0.68
CASC3-206ENST00000579238 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
CASC3-206ENST00000579238 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
CASC3-206ENST00000579238 CENPFP49454 3210 aa10.82□□□□□ -0.68
CASC3-206ENST00000579238 TCP10L2B9ZVM9 353 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms