RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 YDJCA8MPS7 323 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 MX1P20591 662 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 TICAM2Q86XR7 235 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 GPC2Q8N158 579 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
LINC01543-201ENST00000578367 TLR7Q9NYK1 1049 aaKnown RBP16.94■□□□□ 0.3
LINC01543-201ENST00000578367 GLRX3O76003 335 aaKnown RBP16.93■□□□□ 0.3
LINC01543-201ENST00000578367 CXCL9Q07325 125 aa16.93■□□□□ 0.3
LINC01543-201ENST00000578367 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
LINC01543-201ENST00000578367 PDE1AP54750 535 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 RASGRF1Q13972 1273 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 SPATA5Q8NB90 893 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 DPF2Q92785 391 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
LINC01543-201ENST00000578367 GLTPD2A6NH11 291 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 MCAMP43121 646 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 GTF2IP78347 998 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
LINC01543-201ENST00000578367 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
LINC01543-201ENST00000578367 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
LINC01543-201ENST00000578367 HAUS7Q99871 368 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 COL4A5P29400 1685 aa16.91■□□□□ 0.3
LINC01543-201ENST00000578367 PSMD14O00487 310 aa16.9■□□□□ 0.3
LINC01543-201ENST00000578367 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
LINC01543-201ENST00000578367 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
LINC01543-201ENST00000578367 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
LINC01543-201ENST00000578367 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
LINC01543-201ENST00000578367 RAD17O75943 681 aa16.89■□□□□ 0.29
LINC01543-201ENST00000578367 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.29
LINC01543-201ENST00000578367 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
LINC01543-201ENST00000578367 GMLQ99445 158 aa16.89■□□□□ 0.29
LINC01543-201ENST00000578367 MAST3O60307 1309 aa16.89■□□□□ 0.29
LINC01543-201ENST00000578367 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
LINC01543-201ENST00000578367 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
LINC01543-201ENST00000578367 SBF1O95248 1867 aa16.88■□□□□ 0.29
LINC01543-201ENST00000578367 UTRNP46939 3433 aa16.87■□□□□ 0.29
LINC01543-201ENST00000578367 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
LINC01543-201ENST00000578367 SCARF1Q14162 830 aa16.87■□□□□ 0.29
LINC01543-201ENST00000578367 LRRFIP1Q32MZ4 808 aaKnown RBP16.87■□□□□ 0.29
LINC01543-201ENST00000578367 SLF2Q8IX21 1173 aa16.87■□□□□ 0.29
LINC01543-201ENST00000578367 OTUD7AQ8TE49 926 aaPredicted RBP16.87■□□□□ 0.29
LINC01543-201ENST00000578367 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
LINC01543-201ENST00000578367 HDAC9Q9UKV0 1011 aa16.87■□□□□ 0.29
LINC01543-201ENST00000578367 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
LINC01543-201ENST00000578367 DICER1Q9UPY3 1922 aaKnown RBP16.87■□□□□ 0.29
LINC01543-201ENST00000578367 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 PDE4AP27815 886 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 ZAP70P43403 619 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 OGFOD1Q8N543 542 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
LINC01543-201ENST00000578367 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
LINC01543-201ENST00000578367 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
LINC01543-201ENST00000578367 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
LINC01543-201ENST00000578367 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
LINC01543-201ENST00000578367 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
LINC01543-201ENST00000578367 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
LINC01543-201ENST00000578367 PAG1Q9NWQ8 432 aa16.85■□□□□ 0.29
LINC01543-201ENST00000578367 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
LINC01543-201ENST00000578367 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
LINC01543-201ENST00000578367 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
LINC01543-201ENST00000578367 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
LINC01543-201ENST00000578367 GSTO1P78417 241 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 ZSCAN25Q6NSZ9 544 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 CERS5Q8N5B7 392 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 FAM163AQ96GL9 167 aaPredicted RBP16.84■□□□□ 0.29
LINC01543-201ENST00000578367 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01543-201ENST00000578367 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
LINC01543-201ENST00000578367 H7C1D1 291 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 DDNO94850 711 aaPredicted RBP16.83■□□□□ 0.28
LINC01543-201ENST00000578367 LDHCP07864 332 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 HHIPL2Q6UWX4 724 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 PI16Q6UXB8 463 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 MTMR14Q8NCE2 650 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 DNAJC2Q99543 621 aaKnown RBP16.83■□□□□ 0.28
LINC01543-201ENST00000578367 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 GPRC5DQ9NZD1 345 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 LRP2BPQ9P2M1 347 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
LINC01543-201ENST00000578367 GOLIM4O00461 696 aa16.82■□□□□ 0.28
LINC01543-201ENST00000578367 MAP4K4O95819 1239 aaPredicted RBP16.82■□□□□ 0.28
LINC01543-201ENST00000578367 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
LINC01543-201ENST00000578367 SCNN1DP51172 638 aa16.82■□□□□ 0.28
LINC01543-201ENST00000578367 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
LINC01543-201ENST00000578367 KBTBD3Q8NAB2 608 aa16.82■□□□□ 0.28
LINC01543-201ENST00000578367 CNOT7Q9UIV1 285 aaKnown RBP16.82■□□□□ 0.28
LINC01543-201ENST00000578367 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
LINC01543-201ENST00000578367 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
LINC01543-201ENST00000578367 PRDX5P30044 214 aa16.81■□□□□ 0.28
LINC01543-201ENST00000578367 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms