RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
IKBKE-201ENST00000578328 LRP5O75197 1615 aa16.35■□□□□ 0.21
IKBKE-201ENST00000578328 FOXP2O15409 715 aa16.35■□□□□ 0.21
IKBKE-201ENST00000578328 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
IKBKE-201ENST00000578328 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.35■□□□□ 0.21
IKBKE-201ENST00000578328 FAM13BQ9NYF5 915 aa16.35■□□□□ 0.21
IKBKE-201ENST00000578328 COL4A1P02462 1669 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 MYH7P12883 1935 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 CHRNDQ07001 517 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
IKBKE-201ENST00000578328 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 TCHHQ07283 1943 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 E7EWF7 191 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 ZPR1O75312 459 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 FGD1P98174 961 aa16.34■□□□□ 0.21
IKBKE-201ENST00000578328 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
IKBKE-201ENST00000578328 LAMA4Q16363 1823 aa16.33■□□□□ 0.21
IKBKE-201ENST00000578328 GPAA1O43292 621 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 ZSCAN22P10073 491 aaPredicted RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 ADD2P35612 726 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 BCAMP50895 628 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 HAND2P61296 217 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 FGAP02671 866 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 CHST3Q7LGC8 479 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 BRF1Q92994 677 aa16.33■□□□□ 0.2
IKBKE-201ENST00000578328 CDC5LQ99459 802 aaKnown RBP16.33■□□□□ 0.2
IKBKE-201ENST00000578328 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
IKBKE-201ENST00000578328 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
IKBKE-201ENST00000578328 PHF14O94880 888 aa16.32■□□□□ 0.2
IKBKE-201ENST00000578328 DHX32Q7L7V1 743 aaKnown RBP16.32■□□□□ 0.2
IKBKE-201ENST00000578328 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
IKBKE-201ENST00000578328 LAMB2P55268 1798 aa16.32■□□□□ 0.2
IKBKE-201ENST00000578328 GADD45BO75293 160 aaPredicted RBP16.31■□□□□ 0.2
IKBKE-201ENST00000578328 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
IKBKE-201ENST00000578328 PDCL3Q9H2J4 239 aa16.31■□□□□ 0.2
IKBKE-201ENST00000578328 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
IKBKE-201ENST00000578328 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
IKBKE-201ENST00000578328 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
IKBKE-201ENST00000578328 NBPF5PQ86XG9 351 aaPredicted RBP16.31■□□□□ 0.2
IKBKE-201ENST00000578328 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
IKBKE-201ENST00000578328 ZKSCAN5Q9Y2L8 839 aa16.31■□□□□ 0.2
IKBKE-201ENST00000578328 ZNF500O60304 480 aaPredicted RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
IKBKE-201ENST00000578328 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 PDE6AP16499 860 aa16.3■□□□□ 0.2
IKBKE-201ENST00000578328 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
IKBKE-201ENST00000578328 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
IKBKE-201ENST00000578328 F13A1P00488 732 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
IKBKE-201ENST00000578328 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
IKBKE-201ENST00000578328 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
IKBKE-201ENST00000578328 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 ARAP2Q8WZ64 1704 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 UQCRHP07919 91 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 SCN7AQ01118 1682 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
IKBKE-201ENST00000578328 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
IKBKE-201ENST00000578328 APPP05067 770 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 LRRC4BQ9NT99 713 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 TCRBV5S4A2TA0A5A2 114 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 JAK2O60674 1132 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 RFC4P35249 363 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
IKBKE-201ENST00000578328 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 TAF1LQ8IZX4 1826 aa16.28■□□□□ 0.2
IKBKE-201ENST00000578328 GYG1P46976 350 aa16.27■□□□□ 0.2
IKBKE-201ENST00000578328 TPTE2Q6XPS3 522 aa16.27■□□□□ 0.2
IKBKE-201ENST00000578328 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
IKBKE-201ENST00000578328 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
IKBKE-201ENST00000578328 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
IKBKE-201ENST00000578328 MINPP1Q9UNW1 487 aa16.27■□□□□ 0.2
IKBKE-201ENST00000578328 ATRNO75882 1429 aa16.27■□□□□ 0.2
IKBKE-201ENST00000578328 ZNF213O14771 459 aa16.27■□□□□ 0.19
IKBKE-201ENST00000578328 NPHP1O15259 732 aa16.27■□□□□ 0.19
IKBKE-201ENST00000578328 SCRN1Q12765 414 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms