RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 H3BRJ5 948 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 RNF225M0QZC1 329 aaPredicted RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 SORBS3O60504 671 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 EIF4EBP3O60516 100 aaPredicted RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 EPHA1P21709 976 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 EIF4BP23588 611 aaKnown RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 ITPKAP23677 461 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 RPS26P11Q5JNZ5 115 aaPredicted RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 TRAPPC3LQ5T215 181 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 ADAMTSL4Q6UY14 1074 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 DTHD1Q6ZMT9 781 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 VN1R5Q7Z5H4 357 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 DCAF11Q8TEB1 546 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 WNT8BQ93098 351 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 CLEC4MQ9H2X3 399 aaPredicted RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 SH2B1Q9NRF2 756 aaPredicted RBP3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 FAM8A1Q9UBU6 413 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 A0A0A0MRY4 1105 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 LINC01387J3KSC0 135 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 ARL4DP49703 201 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 FCGRTP55899 365 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 PIP4K2BP78356 416 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 TRIM28Q13263 835 aaKnown RBP3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 IKBKEQ14164 716 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 SPRED3Q2MJR0 410 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 PRRT3Q5FWE3 981 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 ALYREFQ86V81 257 aaKnown RBP3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 ZNF576Q9H609 170 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 RNF19AQ9NV58 838 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 PPM1HQ9ULR3 514 aa3.8□□□□□ -1.8
PTP4A1-204ENST00000578299 FSCN2O14926 492 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 B3GALT4O96024 378 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 USP17L7P0C7H9 530 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 SPATA31C1P0DKV0 1188 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 ESRRAP11474 423 aaPredicted RBP3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 ELNP15502 786 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 CDC25BP30305 580 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 PCDH1Q08174 1060 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 SETDB1Q15047 1291 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 TXNDC11Q6PKC3 985 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 FBXO11Q86XK2 927 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 FMR1NBQ8N0W7 255 aaPredicted RBP3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 KLHL23Q8NBE8 558 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 C3orf58Q8NDZ4 430 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 DDX54Q8TDD1 881 aaKnown RBP3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 ANKRD24Q8TF21 1146 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 FAM161BQ96MY7 647 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 SOX17Q9H6I2 414 aaPredicted RBP3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 OSGEPQ9NPF4 335 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 SEC31BQ9NQW1 1179 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 VTI1BQ9UEU0 232 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 AKAP2Q9Y2D5 859 aa3.79□□□□□ -1.8
PTP4A1-204ENST00000578299 SOX1O00570 391 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 DEAF1O75398 565 aaPredicted RBP3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 PPP2R3AQ06190 1150 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 C19orf57Q0VDD7 668 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 MRPL58Q14197 206 aaKnown RBP3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 ZNF423Q2M1K9 1284 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 SLC7A3Q8WY07 619 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 CRELD1Q96HD1 420 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 CEP44Q9C0F1 390 aa3.78□□□□□ -1.8
PTP4A1-204ENST00000578299 FAM229AH3BQW9 127 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 DLL1O00548 723 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 VAMP1P23763 118 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 COL8A1P27658 744 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 CD68P34810 354 aaPredicted RBP3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 ST13P50502 369 aaKnown RBP3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 KCNMA1Q12791 1236 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 SUZ12Q15022 739 aaKnown RBP3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 GALNT11Q8NCW6 608 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 NACC1Q96RE7 527 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 CARD10Q9BWT7 1032 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 TMEM39AQ9NV64 488 aa3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 GPN3Q9UHW5 284 aaPredicted RBP3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 TTF2Q9UNY4 1162 aaKnown RBP3.77□□□□□ -1.81
PTP4A1-204ENST00000578299 UNCXA6NJT0 531 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 TM4SF5O14894 197 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 APBA3O96018 575 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 CYP11A1P05108 521 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 CTSHP09668 335 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 GSTM4Q03013 218 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 FAAP100Q0VG06 881 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 AP3B2Q13367 1082 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 TAF1CQ15572 869 aaPredicted RBP3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 IGF2-ASQ6U949 168 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 SV2BQ7L1I2 683 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 MRRFQ96E11 262 aaKnown RBP3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 KLHDC7BQ96G42 594 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 SAMM50Q9Y512 469 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 USP31Q70CQ4 1352 aa3.76□□□□□ -1.81
PTP4A1-204ENST00000578299 C9orf172C9J069 976 aa3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 RBM25P49756 843 aaKnown RBP3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 NRG1Q02297 640 aaPredicted RBP3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 CCDC85BQ15834 202 aaPredicted RBP3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 GRIK4Q16099 956 aa3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 FOXD4L6Q3SYB3 417 aaPredicted RBP3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 HP1BP3Q5SSJ5 553 aaPredicted RBP3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 MEI1Q5TIA1 1274 aa3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 HGSNATQ68CP4 663 aa3.75□□□□□ -1.81
PTP4A1-204ENST00000578299 FOXD4L3Q6VB84 417 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms