RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 EVA1BQ9NVM1 165 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 TIMELESSQ9UNS1 1208 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 PASKQ96RG2 1323 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF541Q9H0D2 1346 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 DLG5Q8TDM6 1919 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 HEG1Q9ULI3 1381 aa5.38□□□□□ -1.55
PTPRM-206ENST00000578093 KDM3BQ7LBC6 1761 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 NUP98P52948 1817 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 A6NJR5 290 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 H0YIN7 160 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 ZBTB24O43167 697 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 GDF9O60383 454 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 F12P00748 615 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 PIP4K2AP48426 406 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 NR6A1Q15406 480 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 ERFEQ4G0M1 354 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 PRPF40BQ6NWY9 871 aaKnown RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 OLFM4Q6UX06 510 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 ANKLE1Q8NAG6 615 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 TAOK3Q9H2K8 898 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 HMX1Q9NP08 348 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 TBC1D2BQ9UPU7 963 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 FCF1Q9Y324 198 aaKnown RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF330Q9Y3S2 320 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-206ENST00000578093 LTBP3Q9NS15 1303 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 LAMB2P55268 1798 aa5.37□□□□□ -1.55
PTPRM-206ENST00000578093 PRAMEF22A3QJZ6 481 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 KCNQ3O43525 872 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 GDF11O95390 407 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 ABL2P42684 1182 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 VEGFBP49765 207 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 MAP10Q9P2G4 905 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 COG6Q9Y2V7 657 aa5.36□□□□□ -1.55
PTPRM-206ENST00000578093 CEMIPQ8WUJ3 1361 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 ABCC12Q96J65 1359 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 RNF123Q5XPI4 1314 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 RNF223E7ERA6 249 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 A1BGP04217 495 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 SRGNP10124 158 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 HSPA8P11142 646 aaKnown RBP5.35□□□□□ -1.55
PTPRM-206ENST00000578093 PDE6BP35913 854 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 FMR1Q06787 632 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRM-206ENST00000578093 LDHDQ86WU2 507 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 CNBD1Q8NA66 436 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 IL17REQ8NFR9 667 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 C7orf43Q8WVR3 580 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 GPKOWQ92917 476 aaPredicted RBP eCLIP5.35□□□□□ -1.55
PTPRM-206ENST00000578093 CLUAP1Q96AJ1 413 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 BRIP1Q9BX63 1249 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 TRIM34Q9BYJ4 488 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 TAF1DQ9H5J8 278 aaPredicted RBP5.35□□□□□ -1.55
PTPRM-206ENST00000578093 GDPD2Q9HCC8 539 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 FKBPLQ9UIM3 349 aa5.35□□□□□ -1.55
PTPRM-206ENST00000578093 TAF1P21675 1872 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 ANKRD36CQ5JPF3 1778 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 KIF7Q2M1P5 1343 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 PPEF1O14829 653 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 SNRPBP14678 240 aaKnown RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 IL6STP40189 918 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 LBX1P52954 281 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 EIF4G2P78344 907 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 WASHC4Q2M389 1173 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 EAPPQ56P03 285 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 MAP1SQ66K74 1059 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF790Q6PG37 636 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 TTC5Q8N0Z6 440 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 UNC93B1Q9H1C4 597 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 PRDM10Q9NQV6 1147 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 ZNF277Q9NRM2 450 aaPredicted RBP5.34□□□□□ -1.55
PTPRM-206ENST00000578093 CASP8AP2Q9UKL3 1982 aa5.34□□□□□ -1.55
PTPRM-206ENST00000578093 A0A087WZG4 1122 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 RASSF10A6NK89 507 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 TMEM88BA6NKF7 163 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 STARD3NLO95772 234 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 EPHX2P34913 555 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 SLC19A1P41440 591 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 CTCFP49711 727 aaPredicted RBP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 ST5P78524 1137 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 FKBP4Q02790 459 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 CCDC93Q567U6 631 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 CC2D1BQ5T0F9 858 aaKnown RBP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 SPRYD7Q5W111 196 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 ZNF598Q86UK7 904 aaKnown RBP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 DZIP3Q86Y13 1208 aaKnown RBP5.33□□□□□ -1.56
PTPRM-206ENST00000578093 EPS8L1Q8TE68 723 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 MASTLQ96GX5 879 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 POM121Q96HA1 1249 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 ABHD8Q96I13 439 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 KNSTRNQ9Y448 316 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 COL4A1P02462 1669 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
PTPRM-206ENST00000578093 RIC1Q4ADV7 1423 aa5.32□□□□□ -1.56
PTPRM-206ENST00000578093 LRRC37AA6NMS7 1700 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms