RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TCRBV5S4A2TA0A5A2 114 aa32.88■■■□□ 2.85
LIMD2-203ENST00000578067 FGAP02671 866 aa32.88■■■□□ 2.85
LIMD2-203ENST00000578067 GJB2P29033 226 aa32.88■■■□□ 2.85
LIMD2-203ENST00000578067 RPS8P62241 208 aaKnown RBP32.88■■■□□ 2.85
LIMD2-203ENST00000578067 MAP3K12Q12852 859 aa32.88■■■□□ 2.85
LIMD2-203ENST00000578067 IMMTQ16891 758 aaKnown RBP32.87■■■□□ 2.85
LIMD2-203ENST00000578067 SYT1P21579 422 aa32.87■■■□□ 2.85
LIMD2-203ENST00000578067 LMBRD1Q9NUN5 540 aa32.87■■■□□ 2.85
LIMD2-203ENST00000578067 CARMIL3Q8ND23 1372 aa32.86■■■□□ 2.85
LIMD2-203ENST00000578067 CCDC24Q8N4L8 307 aa32.86■■■□□ 2.85
LIMD2-203ENST00000578067 BRWD3Q6RI45 1802 aa32.86■■■□□ 2.85
LIMD2-203ENST00000578067 TAF1P21675 1872 aa32.86■■■□□ 2.85
LIMD2-203ENST00000578067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.85■■■□□ 2.85
LIMD2-203ENST00000578067 STX6O43752 255 aa32.85■■■□□ 2.85
LIMD2-203ENST00000578067 TRIM37O94972 964 aa32.85■■■□□ 2.85
LIMD2-203ENST00000578067 EXOSC10Q01780 885 aaKnown RBP32.85■■■□□ 2.85
LIMD2-203ENST00000578067 A0A1B0GUL6 1792 aa32.85■■■□□ 2.85
LIMD2-203ENST00000578067 NFIXQ14938 502 aa32.85■■■□□ 2.85
LIMD2-203ENST00000578067 MYO5AQ9Y4I1 1855 aaKnown RBP32.85■■■□□ 2.85
LIMD2-203ENST00000578067 ZNF804BA4D1E1 1349 aa32.84■■■□□ 2.85
LIMD2-203ENST00000578067 NPHP1O15259 732 aa32.84■■■□□ 2.85
LIMD2-203ENST00000578067 GNL3LQ9NVN8 582 aaKnown RBP32.84■■■□□ 2.85
LIMD2-203ENST00000578067 LAMA4Q16363 1823 aa32.83■■■□□ 2.85
LIMD2-203ENST00000578067 DOCK2Q92608 1830 aa32.83■■■□□ 2.85
LIMD2-203ENST00000578067 ZSCAN22P10073 491 aaPredicted RBP32.83■■■□□ 2.85
LIMD2-203ENST00000578067 FGD1P98174 961 aa32.83■■■□□ 2.85
LIMD2-203ENST00000578067 KLHL40Q2TBA0 621 aa32.83■■■□□ 2.85
LIMD2-203ENST00000578067 MAGEB6Q8N7X4 407 aa32.82■■■□□ 2.84
LIMD2-203ENST00000578067 DDX49Q9Y6V7 483 aaKnown RBP32.82■■■□□ 2.84
LIMD2-203ENST00000578067 TM4SF1P30408 202 aa32.82■■■□□ 2.84
LIMD2-203ENST00000578067 BRF1Q92994 677 aa32.82■■■□□ 2.84
LIMD2-203ENST00000578067 CHAMP1Q96JM3 812 aa32.82■■■□□ 2.84
LIMD2-203ENST00000578067 PRPF40AO75400 957 aaKnown RBP32.81■■■□□ 2.84
LIMD2-203ENST00000578067 GYG1P46976 350 aa32.81■■■□□ 2.84
LIMD2-203ENST00000578067 STK3Q13188 491 aa32.81■■■□□ 2.84
LIMD2-203ENST00000578067 CAVIN4Q5BKX8 364 aa32.81■■■□□ 2.84
LIMD2-203ENST00000578067 LRRC2Q9BYS8 371 aa32.81■■■□□ 2.84
LIMD2-203ENST00000578067 HAND2P61296 217 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 AIDAQ96BJ3 306 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 AGXT2Q9BYV1 514 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 ZNF213O14771 459 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 GTF3C6Q969F1 213 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 STRBPQ96SI9 672 aaKnown RBP32.8■■■□□ 2.84
LIMD2-203ENST00000578067 ANKRD2Q9GZV1 360 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 UBR3Q6ZT12 1888 aa32.8■■■□□ 2.84
LIMD2-203ENST00000578067 WTIPA6NIX2 430 aaPredicted RBP32.79■■■□□ 2.84
LIMD2-203ENST00000578067 PDIA4P13667 645 aaKnown RBP32.79■■■□□ 2.84
LIMD2-203ENST00000578067 CNBD1Q8NA66 436 aa32.78■■■□□ 2.84
LIMD2-203ENST00000578067 RBM6P78332 1123 aaKnown RBP32.77■■■□□ 2.84
LIMD2-203ENST00000578067 LRP2BPQ9P2M1 347 aa32.77■■■□□ 2.84
LIMD2-203ENST00000578067 APPP05067 770 aa32.77■■■□□ 2.84
LIMD2-203ENST00000578067 GYS1P13807 737 aa32.77■■■□□ 2.84
LIMD2-203ENST00000578067 ZNF772Q68DY9 489 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-203ENST00000578067 FAM84BQ96KN1 310 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-203ENST00000578067 IQSEC3Q9UPP2 1182 aaPredicted RBP32.77■■■□□ 2.84
LIMD2-203ENST00000578067 DTNBO60941 627 aa32.76■■■□□ 2.83
LIMD2-203ENST00000578067 F13A1P00488 732 aa32.76■■■□□ 2.83
LIMD2-203ENST00000578067 VPS37DQ86XT2 251 aa32.76■■■□□ 2.83
LIMD2-203ENST00000578067 MTMR6Q9Y217 621 aa32.76■■■□□ 2.83
LIMD2-203ENST00000578067 TNRC6CQ9HCJ0 1690 aaKnown RBP32.76■■■□□ 2.83
LIMD2-203ENST00000578067 HMGB2P26583 209 aaKnown RBP32.75■■■□□ 2.83
LIMD2-203ENST00000578067 FBXL16Q8N461 479 aa32.75■■■□□ 2.83
LIMD2-203ENST00000578067 PDCP20941 246 aa32.75■■■□□ 2.83
LIMD2-203ENST00000578067 PFKFB2O60825 505 aa32.74■■■□□ 2.83
LIMD2-203ENST00000578067 ALX1Q15699 326 aa32.74■■■□□ 2.83
LIMD2-203ENST00000578067 LARP1BQ659C4 914 aaKnown RBP32.74■■■□□ 2.83
LIMD2-203ENST00000578067 NCOA7Q8NI08 942 aa32.74■■■□□ 2.83
LIMD2-203ENST00000578067 DENND2AQ9ULE3 1009 aa32.74■■■□□ 2.83
LIMD2-203ENST00000578067 PATL2C9JE40 543 aaKnown RBP32.73■■■□□ 2.83
LIMD2-203ENST00000578067 MBD4O95243 580 aa32.73■■■□□ 2.83
LIMD2-203ENST00000578067 FBXO33Q7Z6M2 555 aa32.73■■■□□ 2.83
LIMD2-203ENST00000578067 ATP6V1DQ9Y5K8 247 aa32.73■■■□□ 2.83
LIMD2-203ENST00000578067 APOBRQ0VD83 1088 aa32.73■■■□□ 2.83
LIMD2-203ENST00000578067 TXNRD1Q16881 649 aa32.73■■■□□ 2.83
LIMD2-203ENST00000578067 ZMYM6O95789 1325 aa32.72■■■□□ 2.83
LIMD2-203ENST00000578067 PRR5LQ6MZQ0 368 aa32.72■■■□□ 2.83
LIMD2-203ENST00000578067 CHST3Q7LGC8 479 aa32.72■■■□□ 2.83
LIMD2-203ENST00000578067 MB21D2Q8IYB1 491 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-203ENST00000578067 MCM5P33992 734 aa32.72■■■□□ 2.83
LIMD2-203ENST00000578067 FOXD4L6Q3SYB3 417 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-203ENST00000578067 FOXD4L3Q6VB84 417 aaPredicted RBP32.72■■■□□ 2.83
LIMD2-203ENST00000578067 RALYLQ86SE5 291 aaKnown RBP32.72■■■□□ 2.83
LIMD2-203ENST00000578067 SEMA3EO15041 775 aa32.71■■■□□ 2.83
LIMD2-203ENST00000578067 SCRN1Q12765 414 aa32.71■■■□□ 2.83
LIMD2-203ENST00000578067 PROM2Q8N271 834 aa32.71■■■□□ 2.83
LIMD2-203ENST00000578067 ARMT1Q9H993 441 aa32.71■■■□□ 2.83
LIMD2-203ENST00000578067 COL1A1P02452 1464 aaPredicted RBP32.7■■■□□ 2.83
LIMD2-203ENST00000578067 GRAPQ13588 217 aa32.7■■■□□ 2.83
LIMD2-203ENST00000578067 GRAPLQ8TC17 118 aaPredicted RBP32.7■■■□□ 2.83
LIMD2-203ENST00000578067 ZNF274Q96GC6 653 aaPredicted RBP32.7■■■□□ 2.83
LIMD2-203ENST00000578067 NBPF3Q9H094 633 aa32.7■■■□□ 2.83
LIMD2-203ENST00000578067 ABCF2Q9UG63 623 aa32.7■■■□□ 2.83
LIMD2-203ENST00000578067 PNPLA7Q6ZV29 1317 aa32.7■■■□□ 2.83
LIMD2-203ENST00000578067 FSD2A1L4K1 749 aa32.7■■■□□ 2.82
LIMD2-203ENST00000578067 VPS37CA5D8V6 355 aaPredicted RBP32.7■■■□□ 2.82
LIMD2-203ENST00000578067 GOLGA6L3A6NEY3 463 aa32.7■■■□□ 2.82
LIMD2-203ENST00000578067 GNAT2P19087 354 aa32.7■■■□□ 2.82
LIMD2-203ENST00000578067 LLPHQ9BRT6 129 aaKnown RBP32.7■■■□□ 2.82
LIMD2-203ENST00000578067 NCLP19338 710 aaKnown RBP32.69■■■□□ 2.82
LIMD2-203ENST00000578067 WDR19Q8NEZ3 1342 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms