RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 EFCC1Q9HA90 598 aa17.52■□□□□ 0.4
SREBF1-217ENST00000577897 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
SREBF1-217ENST00000577897 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
SREBF1-217ENST00000577897 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
SREBF1-217ENST00000577897 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
SREBF1-217ENST00000577897 H0YGN5 161 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 MYCP01106 439 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-217ENST00000577897 TRIM27P14373 513 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 INHBEP58166 350 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 CHRDL2Q6WN34 429 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 PODNQ7Z5L7 613 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 MRPL50Q8N5N7 158 aaKnown RBP17.5■□□□□ 0.39
SREBF1-217ENST00000577897 SLC10A4Q96EP9 437 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-217ENST00000577897 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
SREBF1-217ENST00000577897 CRHR2Q13324 411 aa17.49■□□□□ 0.39
SREBF1-217ENST00000577897 SLC4A8Q2Y0W8 1093 aa17.49■□□□□ 0.39
SREBF1-217ENST00000577897 LDLRAD1Q5T700 205 aa17.49■□□□□ 0.39
SREBF1-217ENST00000577897 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
SREBF1-217ENST00000577897 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
SREBF1-217ENST00000577897 PTPRCP08575 1304 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 XDHP47989 1333 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
SREBF1-217ENST00000577897 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 WNK4Q96J92 1243 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
SREBF1-217ENST00000577897 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
SREBF1-217ENST00000577897 MNX1P50219 401 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-217ENST00000577897 SP3Q02447 781 aa17.47■□□□□ 0.39
SREBF1-217ENST00000577897 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
SREBF1-217ENST00000577897 CLMNQ96JQ2 1002 aa17.47■□□□□ 0.39
SREBF1-217ENST00000577897 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-217ENST00000577897 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-217ENST00000577897 CAP1Q01518 475 aa17.46■□□□□ 0.39
SREBF1-217ENST00000577897 SLC9C1Q4G0N8 1177 aa17.46■□□□□ 0.39
SREBF1-217ENST00000577897 DACT2Q5SW24 774 aa17.46■□□□□ 0.39
SREBF1-217ENST00000577897 CCDC30Q5VVM6 783 aa17.46■□□□□ 0.39
SREBF1-217ENST00000577897 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
SREBF1-217ENST00000577897 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 OTUD7BQ6GQQ9 843 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 TSPYL6Q8N831 410 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 UNC80Q8N2C7 3258 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 LAMA3Q16787 3333 aa17.45■□□□□ 0.38
SREBF1-217ENST00000577897 WTIPA6NIX2 430 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-217ENST00000577897 HOXB7P09629 217 aa17.44■□□□□ 0.38
SREBF1-217ENST00000577897 NBPF11Q86T75 865 aa17.44■□□□□ 0.38
SREBF1-217ENST00000577897 KIAA0825Q8IV33 1275 aa17.44■□□□□ 0.38
SREBF1-217ENST00000577897 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
SREBF1-217ENST00000577897 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-217ENST00000577897 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
SREBF1-217ENST00000577897 CACNA1FO60840 1977 aa17.43■□□□□ 0.38
SREBF1-217ENST00000577897 RLBP1P12271 317 aa17.43■□□□□ 0.38
SREBF1-217ENST00000577897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-217ENST00000577897 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-217ENST00000577897 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
SREBF1-217ENST00000577897 PPP1R12BO60237 982 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-217ENST00000577897 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
SREBF1-217ENST00000577897 STRIP1Q5VSL9 837 aa17.42■□□□□ 0.38
SREBF1-217ENST00000577897 TMEM57Q8N5G2 664 aa17.42■□□□□ 0.38
SREBF1-217ENST00000577897 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
SREBF1-217ENST00000577897 LAMB1P07942 1786 aa17.42■□□□□ 0.38
SREBF1-217ENST00000577897 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-217ENST00000577897 MAP3K11Q16584 847 aa17.41■□□□□ 0.38
SREBF1-217ENST00000577897 DPF3Q92784 378 aa17.41■□□□□ 0.38
SREBF1-217ENST00000577897 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-217ENST00000577897 PDE8AO60658 829 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 GJA5P36382 358 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
SREBF1-217ENST00000577897 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 SH3TC2Q8TF17 1288 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 PTPN18Q99952 460 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
SREBF1-217ENST00000577897 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
SREBF1-217ENST00000577897 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-217ENST00000577897 ARHGEF6Q15052 776 aa17.39■□□□□ 0.37
SREBF1-217ENST00000577897 TTLL5Q6EMB2 1281 aa17.39■□□□□ 0.37
SREBF1-217ENST00000577897 MYD88Q99836 296 aa17.39■□□□□ 0.37
SREBF1-217ENST00000577897 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
SREBF1-217ENST00000577897 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
SREBF1-217ENST00000577897 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
SREBF1-217ENST00000577897 CCT4P50991 539 aaKnown RBP17.38■□□□□ 0.37
SREBF1-217ENST00000577897 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
SREBF1-217ENST00000577897 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
SREBF1-217ENST00000577897 CDC5LQ99459 802 aaKnown RBP17.38■□□□□ 0.37
SREBF1-217ENST00000577897 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
SREBF1-217ENST00000577897 CLRN2A0PK11 232 aa17.37■□□□□ 0.37
SREBF1-217ENST00000577897 PCCAP05165 728 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-217ENST00000577897 GTF2IP78347 998 aa17.37■□□□□ 0.37
SREBF1-217ENST00000577897 TAF1CQ15572 869 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-217ENST00000577897 TXNRD3Q86VQ6 643 aa17.37■□□□□ 0.37
SREBF1-217ENST00000577897 ZBTB40Q9NUA8 1239 aa17.37■□□□□ 0.37
SREBF1-217ENST00000577897 MMP14P50281 582 aa17.36■□□□□ 0.37
SREBF1-217ENST00000577897 SUPT20HL1Q3ZLR7 823 aa17.36■□□□□ 0.37
SREBF1-217ENST00000577897 NBPF12Q5TAG4 269 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-217ENST00000577897 ELP3Q9H9T3 547 aa17.36■□□□□ 0.37
SREBF1-217ENST00000577897 VEZTQ9HBM0 779 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms