RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ZBED3Q96IU2 234 aaPredicted RBP18.01■□□□□ 0.47
SMARCD2-205ENST00000577686 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
SMARCD2-205ENST00000577686 KLRK1P26718 216 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 TNFAIP1Q13829 316 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 LDLRAD1Q5T700 205 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 SPRYD7Q5W111 196 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 FBXO46Q6PJ61 603 aaPredicted RBP18■□□□□ 0.47
SMARCD2-205ENST00000577686 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
SMARCD2-205ENST00000577686 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
SMARCD2-205ENST00000577686 VAMP4O75379 141 aa17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 IL1R1P14778 569 aa17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 RBM5P52756 815 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 LDHAL6AQ6ZMR3 332 aa17.99■□□□□ 0.47
SMARCD2-205ENST00000577686 GRM8O00222 908 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 TAF5LO75529 589 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 CFAP100Q494V2 611 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 BEND3Q5T5X7 828 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
SMARCD2-205ENST00000577686 CACNA1FO60840 1977 aa17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 F8W031 263 aaPredicted RBP17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 FOXO4P98177 505 aa17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
SMARCD2-205ENST00000577686 ZNF646O15015 1829 aaPredicted RBP17.96■□□□□ 0.47
SMARCD2-205ENST00000577686 PLIN1O60240 522 aa17.96■□□□□ 0.47
SMARCD2-205ENST00000577686 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
SMARCD2-205ENST00000577686 PRPF38BQ5VTL8 546 aaKnown RBP17.96■□□□□ 0.47
SMARCD2-205ENST00000577686 F6X3S4 739 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 UBE4AQ14139 1066 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 CERS5Q8N5B7 392 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 WNK4Q96J92 1243 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
SMARCD2-205ENST00000577686 CLRN2A0PK11 232 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 TNNI2P48788 182 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 VPS37DQ86XT2 251 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 IFNL1Q8IU54 200 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 ERO1AQ96HE7 468 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 SERPINA10Q9UK55 444 aa17.94■□□□□ 0.46
SMARCD2-205ENST00000577686 HIBADHP31937 336 aaKnown RBP17.93■□□□□ 0.46
SMARCD2-205ENST00000577686 MFSD14BQ5SR56 506 aa17.93■□□□□ 0.46
SMARCD2-205ENST00000577686 SLC4A10Q6U841 1118 aa17.93■□□□□ 0.46
SMARCD2-205ENST00000577686 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
SMARCD2-205ENST00000577686 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
SMARCD2-205ENST00000577686 SNAP23O00161 211 aa17.92■□□□□ 0.46
SMARCD2-205ENST00000577686 WDHD1O75717 1129 aaPredicted RBP17.92■□□□□ 0.46
SMARCD2-205ENST00000577686 ARHGEF6Q15052 776 aa17.92■□□□□ 0.46
SMARCD2-205ENST00000577686 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
SMARCD2-205ENST00000577686 TTF2Q9UNY4 1162 aaKnown RBP17.92■□□□□ 0.46
SMARCD2-205ENST00000577686 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 RASA3Q14644 834 aa17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 ZNF594Q96JF6 807 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 ECM29Q5VYK3 1845 aa17.91■□□□□ 0.46
SMARCD2-205ENST00000577686 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 CAVIN4Q5BKX8 364 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 NBPF12Q5TAG4 269 aaPredicted RBP17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 TBC1D22AQ8WUA7 517 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 HOOK2Q96ED9 719 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 CLMNQ96JQ2 1002 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 JAG2Q9Y219 1238 aa17.9■□□□□ 0.46
SMARCD2-205ENST00000577686 SSC5DA1L4H1 1573 aa17.89■□□□□ 0.45
SMARCD2-205ENST00000577686 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
SMARCD2-205ENST00000577686 ZNF70Q9UC06 446 aaPredicted RBP17.89■□□□□ 0.45
SMARCD2-205ENST00000577686 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
SMARCD2-205ENST00000577686 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
SMARCD2-205ENST00000577686 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
SMARCD2-205ENST00000577686 CSADQ9Y600 493 aa17.88■□□□□ 0.45
SMARCD2-205ENST00000577686 MAST3O60307 1309 aa17.88■□□□□ 0.45
SMARCD2-205ENST00000577686 A0A1B0GUL6 1792 aa17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 USP2O75604 605 aaPredicted RBP17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 GYG1P46976 350 aa17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 HDLBPQ00341 1268 aaKnown RBP17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 OTOP1Q7RTM1 612 aa17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 PCDHAC2Q9Y5I4 1007 aa17.87■□□□□ 0.45
SMARCD2-205ENST00000577686 IGF2BP3O00425 579 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 CRKP46108 304 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 GTF2A2P52657 109 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 METTL24Q5JXM2 366 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 FAM84BQ96KN1 310 aaPredicted RBP17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 EFCC1Q9HA90 598 aa17.86■□□□□ 0.45
SMARCD2-205ENST00000577686 TESPA1A2RU30 521 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms