RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 MTMR14Q8NCE2 650 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 LRCH3Q96II8 777 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 IRS2Q9Y4H2 1338 aa16.34■□□□□ 0.21
CUEDC1-205ENST00000577589 PRUNE2Q8WUY3 3088 aa16.33■□□□□ 0.21
CUEDC1-205ENST00000577589 CLRN2A0PK11 232 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 OPTNQ96CV9 577 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 MYD88Q99836 296 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 GREM2Q9H772 168 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 ELP3Q9H9T3 547 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
CUEDC1-205ENST00000577589 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
CUEDC1-205ENST00000577589 CTSWP56202 376 aa16.32■□□□□ 0.2
CUEDC1-205ENST00000577589 GTF2IP78347 998 aa16.32■□□□□ 0.2
CUEDC1-205ENST00000577589 CCDC191Q8NCU4 936 aa16.32■□□□□ 0.2
CUEDC1-205ENST00000577589 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 CTGFP29279 349 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 DLGAP5Q15398 846 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 TAF1CQ15572 869 aaPredicted RBP16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
CUEDC1-205ENST00000577589 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 IREB2P48200 963 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 RIC3Q7Z5B4 369 aa16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 DPF3Q92784 378 aa16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 TRIM35Q9UPQ4 493 aa16.3■□□□□ 0.2
CUEDC1-205ENST00000577589 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 CCL15Q16663 113 aa16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 SUPT20HL1Q3ZLR7 823 aa16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 DUSP27Q5VZP5 1158 aa16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
CUEDC1-205ENST00000577589 SNAP23O00161 211 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 RASA3Q14644 834 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 LEMD3Q9Y2U8 911 aa16.28■□□□□ 0.2
CUEDC1-205ENST00000577589 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 VGLL4Q14135 290 aa16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 CD209Q9NNX6 404 aa16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-205ENST00000577589 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 TLR2O60603 784 aa16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 GJA8P48165 433 aa16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 ARHGEF6Q15052 776 aa16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 MGAMO43451 1857 aa16.26■□□□□ 0.19
CUEDC1-205ENST00000577589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.25■□□□□ 0.19
CUEDC1-205ENST00000577589 ADGRA2Q96PE1 1338 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 BTBD19C9JJ37 291 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 GTF2A2P52657 109 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 TTC28Q96AY4 2481 aa16.24■□□□□ 0.19
CUEDC1-205ENST00000577589 MUC3AQ02505 3323 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 GJB1P08034 283 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 CCL5P13501 91 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 COL25A1Q9BXS0 654 aaPredicted RBP16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 SRRDQ9UH36 339 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
CUEDC1-205ENST00000577589 SPDYE5A6NIY4 337 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 PRMT2P55345 433 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 Q7L0L9 218 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
CUEDC1-205ENST00000577589 MYO1BO43795 1136 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 GNRH1P01148 92 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 IL1R1P14778 569 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 OSBPP22059 807 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 CHRNDQ07001 517 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 ZCCHC17Q9NP64 241 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 STAP2Q9UGK3 403 aa16.21■□□□□ 0.19
CUEDC1-205ENST00000577589 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms