RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 PPP4R3CPQ6ZMV5 832 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 PI4K2BQ8TCG2 481 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.42□□□□□ -0.74
PRPF8-213ENST00000576407 OSBPL3Q9H4L5 887 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 KCNQ5Q9NR82 932 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 RNF181Q9P0P0 153 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 HMG20BQ9P0W2 317 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 ZNRF3Q9ULT6 936 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 COL1A1P02452 1464 aaPredicted RBP10.42□□□□□ -0.74
PRPF8-213ENST00000576407 AOX1Q06278 1338 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 ERC2O15083 957 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
PRPF8-213ENST00000576407 CHAF1AQ13111 956 aaPredicted RBP10.41□□□□□ -0.74
PRPF8-213ENST00000576407 C9orf131Q5VYM1 1079 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 SPATA5Q8NB90 893 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 BOLA2Q9H3K6 86 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 DENND2AQ9ULE3 1009 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 JAG2Q9Y219 1238 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 RBM19Q9Y4C8 960 aaKnown RBP10.41□□□□□ -0.74
PRPF8-213ENST00000576407 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 CHD4Q14839 1912 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 MYH13Q9UKX3 1938 aa10.41□□□□□ -0.74
PRPF8-213ENST00000576407 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
PRPF8-213ENST00000576407 PDS5AQ29RF7 1337 aaKnown RBP10.4□□□□□ -0.74
PRPF8-213ENST00000576407 FAM205AQ6ZU69 1335 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 SCN9AQ15858 1988 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 FZD9O00144 591 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 RAD17O75943 681 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 ZAP70P43403 619 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 GTF2IP78347 998 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 TTLL5Q6EMB2 1281 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
PRPF8-213ENST00000576407 HAUS7Q99871 368 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 TIAM2Q8IVF5 1701 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 AKAP11Q9UKA4 1901 aa10.4□□□□□ -0.74
PRPF8-213ENST00000576407 USP17L3A6NCW0 530 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 USP17L4A6NCW7 530 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 CYP2E1P05181 493 aaPredicted RBP10.39□□□□□ -0.75
PRPF8-213ENST00000576407 CXCL9Q07325 125 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 STRIP1Q5VSL9 837 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 USP17L1Q7RTZ2 530 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 WDR66Q8TBY9 1149 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 EDC3Q96F86 508 aaKnown RBP10.39□□□□□ -0.75
PRPF8-213ENST00000576407 ANTXR1Q9H6X2 564 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 PAG1Q9NWQ8 432 aa10.39□□□□□ -0.75
PRPF8-213ENST00000576407 ZNF646O15015 1829 aaPredicted RBP10.39□□□□□ -0.75
PRPF8-213ENST00000576407 SALL1Q9NSC2 1324 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 PSME4Q14997 1843 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 GOLIM4O00461 696 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 PSMD14O00487 310 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
PRPF8-213ENST00000576407 GSPT1P15170 499 aaKnown RBP10.38□□□□□ -0.75
PRPF8-213ENST00000576407 EIF6P56537 245 aaKnown RBP10.38□□□□□ -0.75
PRPF8-213ENST00000576407 MFSD14BQ5SR56 506 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 DACT2Q5SW24 774 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 CIAPIN1Q6FI81 312 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 MXD3Q9BW11 206 aa10.38□□□□□ -0.75
PRPF8-213ENST00000576407 ZNF541Q9H0D2 1346 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 VIL1P09327 827 aaKnown RBP10.37□□□□□ -0.75
PRPF8-213ENST00000576407 FKBP1AP62942 108 aaKnown RBP10.37□□□□□ -0.75
PRPF8-213ENST00000576407 TNIP1Q15025 636 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 TTF1Q15361 905 aaPredicted RBP10.37□□□□□ -0.75
PRPF8-213ENST00000576407 ZGPATQ8N5A5 531 aaKnown RBP10.37□□□□□ -0.75
PRPF8-213ENST00000576407 CERS5Q8N5B7 392 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 TBC1D22AQ8WUA7 517 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 PIH1D3Q9NQM4 214 aaKnown RBP10.37□□□□□ -0.75
PRPF8-213ENST00000576407 ABCF2Q9UG63 623 aa10.37□□□□□ -0.75
PRPF8-213ENST00000576407 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
PRPF8-213ENST00000576407 SDSP20132 328 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 PRDX5P30044 214 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 GRIK5Q16478 980 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 BMP2KLQ5H9B9 411 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
PRPF8-213ENST00000576407 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 EVI5LQ96CN4 794 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 LRP2BPQ9P2M1 347 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
PRPF8-213ENST00000576407 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
PRPF8-213ENST00000576407 MYO3BQ8WXR4 1341 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 IDH1O75874 414 aaKnown RBP10.35□□□□□ -0.75
PRPF8-213ENST00000576407 LDHBP07195 334 aaKnown RBP10.35□□□□□ -0.75
PRPF8-213ENST00000576407 SPTY2D1Q68D10 685 aaPredicted RBP10.35□□□□□ -0.75
PRPF8-213ENST00000576407 CNTROBQ8N137 903 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 GPC2Q8N158 579 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 KBTBD3Q8NAB2 608 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 GMLQ99445 158 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 SUGT1Q9Y2Z0 365 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 DOCK2Q92608 1830 aa10.35□□□□□ -0.75
PRPF8-213ENST00000576407 MYO5AQ9Y4I1 1855 aaKnown RBP10.34□□□□□ -0.75
PRPF8-213ENST00000576407 F8W031 263 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-213ENST00000576407 DDNO94850 711 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-213ENST00000576407 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
PRPF8-213ENST00000576407 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
PRPF8-213ENST00000576407 MECOMQ03112 1051 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms