RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ANKRD2Q9GZV1 360 aa20.97■□□□□ 0.95
CTDNEP1-211ENST00000575783 TESPA1A2RU30 521 aaPredicted RBP20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 CFAP100Q494V2 611 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 CHRDL2Q6WN34 429 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 CERS5Q8N5B7 392 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 OTUD5Q96G74 571 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 ELP3Q9H9T3 547 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 CD209Q9NNX6 404 aa20.96■□□□□ 0.95
CTDNEP1-211ENST00000575783 IGKV5-2P06315 115 aa20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 MTMR14Q8NCE2 650 aa20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 OPTNQ96CV9 577 aa20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 PRMT6Q96LA8 375 aaPredicted RBP20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 RANBP2P49792 3224 aaKnown RBP20.95■□□□□ 0.94
CTDNEP1-211ENST00000575783 RBM5P52756 815 aaKnown RBP eCLIP20.94■□□□□ 0.94
CTDNEP1-211ENST00000575783 RASA3Q14644 834 aa20.94■□□□□ 0.94
CTDNEP1-211ENST00000575783 ZFYVE28Q9HCC9 887 aa20.94■□□□□ 0.94
CTDNEP1-211ENST00000575783 A0A0C4DFX4 3053 aa20.94■□□□□ 0.94
CTDNEP1-211ENST00000575783 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 WDR43Q15061 677 aaKnown RBP eCLIP20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 TAF1CQ15572 869 aaPredicted RBP20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 CWF19L2Q2TBE0 894 aaKnown RBP20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 SH3TC2Q8TF17 1288 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 MS4A4AQ96JQ5 239 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 AOX1Q06278 1338 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 TRIOBPQ9H2D6 2365 aa20.93■□□□□ 0.94
CTDNEP1-211ENST00000575783 CEP290O15078 2479 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 SNAP23O00161 211 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 DLL1O00548 723 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 ZNF853P0CG23 659 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 ITGA6P23229 1130 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 NEXNQ0ZGT2 675 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 RALBP1Q15311 655 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 KSR2Q6VAB6 950 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 UBE3BQ7Z3V4 1068 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 C8orf58Q8NAV2 365 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 BRI3BPQ8WY22 251 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 DPF3Q92784 378 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 JAG2Q9Y219 1238 aa20.92■□□□□ 0.94
CTDNEP1-211ENST00000575783 CCL15-CCL14A0A0B4J2E2 113 aa20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 CHRNDQ07001 517 aa20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 CCL15Q16663 113 aa20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 CCDC30Q5VVM6 783 aa20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 RBBP6Q7Z6E9 1792 aaKnown RBP20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 CNKSR2Q8WXI2 1034 aa20.91■□□□□ 0.94
CTDNEP1-211ENST00000575783 SLC17A8Q8NDX2 589 aa20.9■□□□□ 0.94
CTDNEP1-211ENST00000575783 RBM27Q9P2N5 1060 aaKnown RBP20.9■□□□□ 0.94
CTDNEP1-211ENST00000575783 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
CTDNEP1-211ENST00000575783 TAF5LO75529 589 aa20.89■□□□□ 0.93
CTDNEP1-211ENST00000575783 GNAI1P63096 354 aa20.89■□□□□ 0.93
CTDNEP1-211ENST00000575783 HELBQ8NG08 1087 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-211ENST00000575783 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
CTDNEP1-211ENST00000575783 ZNF646O15015 1829 aaPredicted RBP20.89■□□□□ 0.93
CTDNEP1-211ENST00000575783 NEURL1BA8MQ27 555 aa20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 H7C1W4 665 aa20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 ECM2O94769 699 aaPredicted RBP20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 GTF2A2P52657 109 aa20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 ARHGAP39Q9C0H5 1083 aa20.88■□□□□ 0.93
CTDNEP1-211ENST00000575783 KIF22Q14807 665 aa20.87■□□□□ 0.93
CTDNEP1-211ENST00000575783 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.87■□□□□ 0.93
CTDNEP1-211ENST00000575783 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
CTDNEP1-211ENST00000575783 WDHD1O75717 1129 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-211ENST00000575783 TNFAIP1Q13829 316 aa20.86■□□□□ 0.93
CTDNEP1-211ENST00000575783 ZNF804AQ7Z570 1209 aa20.86■□□□□ 0.93
CTDNEP1-211ENST00000575783 ZNF70Q9UC06 446 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-211ENST00000575783 IL1R1P14778 569 aa20.85■□□□□ 0.93
CTDNEP1-211ENST00000575783 MAP3K9P80192 1104 aa20.85■□□□□ 0.93
CTDNEP1-211ENST00000575783 VGLL4Q14135 290 aa20.85■□□□□ 0.93
CTDNEP1-211ENST00000575783 CDAN1Q8IWY9 1227 aa20.85■□□□□ 0.93
CTDNEP1-211ENST00000575783 TDRD3Q9H7E2 651 aaKnown RBP20.85■□□□□ 0.93
CTDNEP1-211ENST00000575783 IRS2Q9Y4H2 1338 aa20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 CSF1RP07333 972 aa20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 FKBP1AP62942 108 aaKnown RBP20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 LACTBP83111 547 aaPredicted RBP20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 TSPYL6Q8N831 410 aa20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 CSADQ9Y600 493 aa20.84■□□□□ 0.93
CTDNEP1-211ENST00000575783 COL6A3P12111 3177 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 SPEF2Q9C093 1822 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 ANKRD18BA2A2Z9 1011 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 TCP10L2B9ZVM9 353 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 TLR2O60603 784 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 MTFR1Q15390 333 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 SPDYE2Q495Y8 402 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 C15orf52Q6ZUT6 534 aaKnown RBP20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 PLA2G12BQ9BX93 195 aa20.83■□□□□ 0.93
CTDNEP1-211ENST00000575783 GCKRQ14397 625 aa20.82■□□□□ 0.92
CTDNEP1-211ENST00000575783 SHISA4Q96DD7 197 aa20.82■□□□□ 0.92
CTDNEP1-211ENST00000575783 TEPSINQ96N21 525 aa20.82■□□□□ 0.92
CTDNEP1-211ENST00000575783 STK31Q9BXU1 1019 aa20.82■□□□□ 0.92
CTDNEP1-211ENST00000575783 TMEM39BQ9GZU3 492 aa20.82■□□□□ 0.92
CTDNEP1-211ENST00000575783 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
CTDNEP1-211ENST00000575783 APAF1O14727 1248 aa20.81■□□□□ 0.92
CTDNEP1-211ENST00000575783 PLIN1O60240 522 aa20.81■□□□□ 0.92
CTDNEP1-211ENST00000575783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.81■□□□□ 0.92
CTDNEP1-211ENST00000575783 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms