RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CSF1RP07333 972 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 CRHR2Q13324 411 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 TNFAIP1Q13829 316 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 CFAP100Q494V2 611 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 UBE3BQ7Z3V4 1068 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 ZNF804AQ7Z570 1209 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 CD99L2Q8TCZ2 262 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
SMG6-218ENST00000575454 COL4A1P02462 1669 aa11.51□□□□□ -0.57
SMG6-218ENST00000575454 LAMB2P55268 1798 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 ANKRD18BA2A2Z9 1011 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 KLRK1P26718 216 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 CHRNDQ07001 517 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 GCKRQ14397 625 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
SMG6-218ENST00000575454 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
SMG6-218ENST00000575454 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 USP2O75604 605 aaPredicted RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 IL1R1P14778 569 aa11.49□□□□□ -0.57
SMG6-218ENST00000575454 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 RBM5P52756 815 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMG6-218ENST00000575454 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 RASA3Q14644 834 aa11.49□□□□□ -0.57
SMG6-218ENST00000575454 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
SMG6-218ENST00000575454 PRMT6Q96LA8 375 aaPredicted RBP11.49□□□□□ -0.57
SMG6-218ENST00000575454 ZFYVE28Q9HCC9 887 aa11.49□□□□□ -0.57
SMG6-218ENST00000575454 FZD1Q9UP38 647 aa11.49□□□□□ -0.57
SMG6-218ENST00000575454 DLG5Q8TDM6 1919 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 CLRN2A0PK11 232 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 F8W031 263 aaPredicted RBP11.48□□□□□ -0.57
SMG6-218ENST00000575454 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMG6-218ENST00000575454 GTF2A2P52657 109 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 CERS5Q8N5B7 392 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 OPTNQ96CV9 577 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 PTPN18Q99952 460 aa11.48□□□□□ -0.57
SMG6-218ENST00000575454 COL6A3P12111 3177 aa11.47□□□□□ -0.57
SMG6-218ENST00000575454 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
SMG6-218ENST00000575454 SLC4A8Q2Y0W8 1093 aa11.47□□□□□ -0.57
SMG6-218ENST00000575454 TSPYL6Q8N831 410 aa11.47□□□□□ -0.57
SMG6-218ENST00000575454 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
SMG6-218ENST00000575454 GNRH1P01148 92 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 GJA5P36382 358 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 TNNI2P48788 182 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 CASP7P55210 303 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 KIF22Q14807 665 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
SMG6-218ENST00000575454 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
SMG6-218ENST00000575454 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 CSADQ9Y600 493 aa11.46□□□□□ -0.57
SMG6-218ENST00000575454 SCN9AQ15858 1988 aa11.46□□□□□ -0.58
SMG6-218ENST00000575454 IRS2Q9Y4H2 1338 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 CCL15-CCL14A0A0B4J2E2 113 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 TAF5LO75529 589 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 PRMT2P55345 433 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 FLIIQ13045 1269 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
SMG6-218ENST00000575454 CCL15Q16663 113 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 ZCCHC17Q9NP64 241 aaKnown RBP11.45□□□□□ -0.58
SMG6-218ENST00000575454 ZNF70Q9UC06 446 aaPredicted RBP11.45□□□□□ -0.58
SMG6-218ENST00000575454 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
SMG6-218ENST00000575454 AKAP11Q9UKA4 1901 aa11.45□□□□□ -0.58
SMG6-218ENST00000575454 FAM205AQ6ZU69 1335 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 CETPP11597 493 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 MFSD14BQ5SR56 506 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
SMG6-218ENST00000575454 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
SMG6-218ENST00000575454 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 PCDHAC2Q9Y5I4 1007 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 PTCH2Q9Y6C5 1203 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 SSC5DA1L4H1 1573 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 TAF1P21675 1872 aa11.44□□□□□ -0.58
SMG6-218ENST00000575454 SNAP23O00161 211 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 TLR2O60603 784 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 VGLL4Q14135 290 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.43□□□□□ -0.58
SMG6-218ENST00000575454 G2E3Q7L622 706 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
SMG6-218ENST00000575454 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
SMG6-218ENST00000575454 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
SMG6-218ENST00000575454 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
SMG6-218ENST00000575454 IL16Q14005 1332 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms