RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZNF202O95125 648 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
SMG6-215ENST00000574501 PDE11AQ9HCR9 933 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 TEFQ10587 303 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
SMG6-215ENST00000574501 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 DHX58Q96C10 678 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 MPHOSPH8Q99549 860 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 PSD3Q9NYI0 1048 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.25
SMG6-215ENST00000574501 LEKR1Q6ZMV7 388 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 LGR6Q9HBX8 967 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 RTEL1Q9NZ71 1219 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 TOGARAM2Q6ZUX3 1019 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
SMG6-215ENST00000574501 ANKRD65E5RJM6 399 aa16.63■□□□□ 0.25
SMG6-215ENST00000574501 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
SMG6-215ENST00000574501 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
SMG6-215ENST00000574501 PDILTQ8N807 584 aa16.63■□□□□ 0.25
SMG6-215ENST00000574501 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
SMG6-215ENST00000574501 TXLNAP40222 546 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 VSTM4Q8IW00 320 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
SMG6-215ENST00000574501 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 A0A0G2JLW4 131 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
SMG6-215ENST00000574501 ICE2Q659A1 982 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 WWC2Q6AWC2 1192 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
SMG6-215ENST00000574501 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 IRX2Q9BZI1 471 aaPredicted RBP16.62■□□□□ 0.25
SMG6-215ENST00000574501 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
SMG6-215ENST00000574501 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 MAP2K7O14733 419 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 IKBKBO14920 756 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 SPTLC2O15270 562 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 PACS2Q86VP3 889 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 DESI2Q9BSY9 194 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 SUGCTQ9HAC7 445 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 ZNF609O15014 1411 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 FDPSP14324 419 aaKnown RBP16.61■□□□□ 0.25
SMG6-215ENST00000574501 PFKFB1P16118 471 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
SMG6-215ENST00000574501 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 BAG1Q99933 345 aaPredicted RBP16.61■□□□□ 0.25
SMG6-215ENST00000574501 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
SMG6-215ENST00000574501 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
SMG6-215ENST00000574501 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
SMG6-215ENST00000574501 SALL1Q9NSC2 1324 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
SMG6-215ENST00000574501 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 ABCC6O95255 1503 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 CCDC151A5D8V7 595 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
SMG6-215ENST00000574501 PDIA3P30101 505 aaKnown RBP16.6■□□□□ 0.25
SMG6-215ENST00000574501 FCHSD1Q86WN1 690 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 FAN1Q9Y2M0 1017 aa16.6■□□□□ 0.25
SMG6-215ENST00000574501 MYL5Q02045 173 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
SMG6-215ENST00000574501 INTS13Q9NVM9 706 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 GRM8O00222 908 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 PHACTR2O75167 634 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 IVLP07476 585 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 TTC31Q49AM3 519 aaPredicted RBP16.59■□□□□ 0.25
SMG6-215ENST00000574501 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
SMG6-215ENST00000574501 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 PLEKHA4Q9H4M7 779 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
SMG6-215ENST00000574501 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.25
SMG6-215ENST00000574501 CHMP4BP1P59074 171 aa16.58■□□□□ 0.25
SMG6-215ENST00000574501 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.25
SMG6-215ENST00000574501 PNOCQ13519 176 aa16.58■□□□□ 0.25
SMG6-215ENST00000574501 BEND6Q5SZJ8 279 aaPredicted RBP16.58■□□□□ 0.25
SMG6-215ENST00000574501 ANKZF1Q9H8Y5 726 aa16.58■□□□□ 0.25
SMG6-215ENST00000574501 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.25
SMG6-215ENST00000574501 EIF3CLB5ME19 914 aaKnown RBP16.58■□□□□ 0.24
SMG6-215ENST00000574501 HOXC9P31274 260 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms