RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
ABR-228ENST00000574437 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 CPLX1O14810 134 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 KIF20AO95235 890 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 EVA1CP58658 441 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 KMT5BQ4FZB7 885 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 NYAP1Q6ZVC0 841 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 DSCC1Q9BVC3 393 aa17.3■□□□□ 0.36
ABR-228ENST00000574437 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
ABR-228ENST00000574437 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
ABR-228ENST00000574437 SYNE3Q6ZMZ3 975 aa17.29■□□□□ 0.36
ABR-228ENST00000574437 FMR1NBQ8N0W7 255 aaPredicted RBP17.29■□□□□ 0.36
ABR-228ENST00000574437 MEGF6O75095 1541 aa17.29■□□□□ 0.36
ABR-228ENST00000574437 MAST3O60307 1309 aa17.29■□□□□ 0.36
ABR-228ENST00000574437 PHKG2P15735 406 aa17.29■□□□□ 0.36
ABR-228ENST00000574437 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
ABR-228ENST00000574437 FDPSP14324 419 aaKnown RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 GSDMDP57764 484 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 ADALQ6DHV7 355 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 ORC3Q9UBD5 711 aaPredicted RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 SLU7O95391 586 aaKnown RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 SLC3A2P08195 630 aaKnown RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 SFPQP23246 707 aaKnown RBP eCLIP17.28■□□□□ 0.36
ABR-228ENST00000574437 SYT10Q6XYQ8 523 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 KIAA1468Q9P260 1216 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 KLF18A0A0U1RQI7 1052 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 GOLGA8BA8MQT2 603 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 M0R2C6 588 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 ATL3Q6DD88 541 aa17.28■□□□□ 0.36
ABR-228ENST00000574437 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
ABR-228ENST00000574437 SPTLC2O15270 562 aa17.27■□□□□ 0.36
ABR-228ENST00000574437 MARCKSP29966 332 aaPredicted RBP17.27■□□□□ 0.36
ABR-228ENST00000574437 FBXO38Q6PIJ6 1188 aa17.27■□□□□ 0.36
ABR-228ENST00000574437 NBPF11Q86T75 865 aa17.27■□□□□ 0.36
ABR-228ENST00000574437 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
ABR-228ENST00000574437 CABP4P57796 275 aa17.27■□□□□ 0.35
ABR-228ENST00000574437 TPM4P67936 248 aa17.27■□□□□ 0.35
ABR-228ENST00000574437 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.35
ABR-228ENST00000574437 ERO1AQ96HE7 468 aa17.27■□□□□ 0.35
ABR-228ENST00000574437 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.35
ABR-228ENST00000574437 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 NRDCO43847 1150 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 KRT222Q8N1A0 295 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 OSBP2Q969R2 916 aa17.26■□□□□ 0.35
ABR-228ENST00000574437 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
ABR-228ENST00000574437 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 PRC1O43663 620 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 ZNF202O95125 648 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 E4F1Q66K89 784 aaPredicted RBP17.25■□□□□ 0.35
ABR-228ENST00000574437 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 ERCC6LQ2NKX8 1250 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 ARMCX5Q6P1M9 558 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
ABR-228ENST00000574437 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 KDM6AO15550 1401 aaPredicted RBP17.25■□□□□ 0.35
ABR-228ENST00000574437 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
ABR-228ENST00000574437 FOXO4P98177 505 aa17.24■□□□□ 0.35
ABR-228ENST00000574437 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
ABR-228ENST00000574437 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
ABR-228ENST00000574437 LRP10Q7Z4F1 713 aa17.24■□□□□ 0.35
ABR-228ENST00000574437 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
ABR-228ENST00000574437 IL15P40933 162 aaPredicted RBP17.24■□□□□ 0.35
ABR-228ENST00000574437 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
ABR-228ENST00000574437 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
ABR-228ENST00000574437 MORC2Q9Y6X9 1032 aaPredicted RBP17.24■□□□□ 0.35
ABR-228ENST00000574437 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 CWC25Q9NXE8 425 aaPredicted RBP17.23■□□□□ 0.35
ABR-228ENST00000574437 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 WDR17Q8IZU2 1322 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 MRC1P22897 1456 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 EYA2O00167 538 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
ABR-228ENST00000574437 RXRAP19793 462 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 CASP7P55210 303 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 FBXO18Q8NFZ0 1043 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 CHMP4CQ96CF2 233 aa17.23■□□□□ 0.35
ABR-228ENST00000574437 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
ABR-228ENST00000574437 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
ABR-228ENST00000574437 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
ABR-228ENST00000574437 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
ABR-228ENST00000574437 A0A1W2PQD8 194 aa17.22■□□□□ 0.35
ABR-228ENST00000574437 KIF2AO00139 706 aaPredicted RBP17.22■□□□□ 0.35
ABR-228ENST00000574437 ATP1A3P13637 1013 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms