RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
CDC27-216ENST00000574304 MRPL18Q9H0U6 180 aaKnown RBP8.71□□□□□ -1.02
CDC27-216ENST00000574304 OSGEPQ9NPF4 335 aa8.71□□□□□ -1.02
CDC27-216ENST00000574304 SPRED3Q2MJR0 410 aa8.7□□□□□ -1.02
CDC27-216ENST00000574304 FOXD4L6Q3SYB3 417 aaPredicted RBP8.7□□□□□ -1.02
CDC27-216ENST00000574304 FOXD4L3Q6VB84 417 aaPredicted RBP8.7□□□□□ -1.02
CDC27-216ENST00000574304 TXNRD3Q86VQ6 643 aa8.7□□□□□ -1.02
CDC27-216ENST00000574304 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
CDC27-216ENST00000574304 ARL4DP49703 201 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 GRM2Q14416 872 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 SUZ12Q15022 739 aaKnown RBP8.69□□□□□ -1.02
CDC27-216ENST00000574304 PI16Q6UXB8 463 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 KLHDC7BQ96G42 594 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 KCNK4Q9NYG8 393 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
CDC27-216ENST00000574304 SOX1O00570 391 aaPredicted RBP8.68□□□□□ -1.02
CDC27-216ENST00000574304 ESRRAP11474 423 aaPredicted RBP8.68□□□□□ -1.02
CDC27-216ENST00000574304 C19orf57Q0VDD7 668 aa8.68□□□□□ -1.02
CDC27-216ENST00000574304 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDC27-216ENST00000574304 HGSNATQ68CP4 663 aa8.68□□□□□ -1.02
CDC27-216ENST00000574304 PRPF40BQ6NWY9 871 aaKnown RBP8.68□□□□□ -1.02
CDC27-216ENST00000574304 WFDC12Q8WWY7 111 aa8.68□□□□□ -1.02
CDC27-216ENST00000574304 ANKRD33BA6NCL7 494 aa8.67□□□□□ -1.02
CDC27-216ENST00000574304 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
CDC27-216ENST00000574304 P4HBP07237 508 aaKnown RBP8.67□□□□□ -1.02
CDC27-216ENST00000574304 TMEM130Q8N3G9 435 aa8.67□□□□□ -1.02
CDC27-216ENST00000574304 FBF1Q8TES7 1133 aa8.67□□□□□ -1.02
CDC27-216ENST00000574304 FOXD4L4Q8WXT5 416 aaPredicted RBP8.67□□□□□ -1.02
CDC27-216ENST00000574304 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
CDC27-216ENST00000574304 AKTIPQ9H8T0 292 aa8.67□□□□□ -1.02
CDC27-216ENST00000574304 ABCB6Q9NP58 842 aa8.67□□□□□ -1.02
CDC27-216ENST00000574304 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 F8W735 103 aaPredicted RBP8.66□□□□□ -1.02
CDC27-216ENST00000574304 ADAM11O75078 769 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 WISP1O95388 367 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 ITPKAP23677 461 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 NOS3P29474 1203 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 IREB2P48200 963 aaKnown RBP8.66□□□□□ -1.02
CDC27-216ENST00000574304 NLRP12P59046 1061 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 ATP2B2Q01814 1243 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 DOC2BQ14184 412 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 ACAD11Q709F0 780 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
CDC27-216ENST00000574304 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
CDC27-216ENST00000574304 ALX3O95076 343 aa8.65□□□□□ -1.02
CDC27-216ENST00000574304 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
CDC27-216ENST00000574304 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
CDC27-216ENST00000574304 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
CDC27-216ENST00000574304 AGGF1Q8N302 714 aaeCLIP8.65□□□□□ -1.02
CDC27-216ENST00000574304 BCO2Q9BYV7 579 aa8.65□□□□□ -1.02
CDC27-216ENST00000574304 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
CDC27-216ENST00000574304 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
CDC27-216ENST00000574304 ZNF423Q2M1K9 1284 aa8.64□□□□□ -1.03
CDC27-216ENST00000574304 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
CDC27-216ENST00000574304 DNAJC14Q6Y2X3 702 aaPredicted RBP8.64□□□□□ -1.03
CDC27-216ENST00000574304 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
CDC27-216ENST00000574304 TPSG1Q9NRR2 321 aa8.64□□□□□ -1.03
CDC27-216ENST00000574304 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
CDC27-216ENST00000574304 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
CDC27-216ENST00000574304 GSTM4Q03013 218 aa8.63□□□□□ -1.03
CDC27-216ENST00000574304 COL19A1Q14993 1142 aa8.63□□□□□ -1.03
CDC27-216ENST00000574304 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
CDC27-216ENST00000574304 KIAA1211Q6ZU35 1233 aa8.63□□□□□ -1.03
CDC27-216ENST00000574304 FCGRTP55899 365 aa8.62□□□□□ -1.03
CDC27-216ENST00000574304 DTHD1Q6ZMT9 781 aa8.62□□□□□ -1.03
CDC27-216ENST00000574304 MEGF10Q96KG7 1140 aa8.62□□□□□ -1.03
CDC27-216ENST00000574304 SSBP4Q9BWG4 385 aaPredicted RBP8.62□□□□□ -1.03
CDC27-216ENST00000574304 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
CDC27-216ENST00000574304 B3GALT4O96024 378 aa8.61□□□□□ -1.03
CDC27-216ENST00000574304 FURINP09958 794 aa8.61□□□□□ -1.03
CDC27-216ENST00000574304 RPS26P11Q5JNZ5 115 aaPredicted RBP8.61□□□□□ -1.03
CDC27-216ENST00000574304 Q6ZS46 218 aa8.61□□□□□ -1.03
CDC27-216ENST00000574304 NPAS4Q8IUM7 802 aa8.61□□□□□ -1.03
CDC27-216ENST00000574304 USP26Q9BXU7 913 aa8.61□□□□□ -1.03
CDC27-216ENST00000574304 XRCC5P13010 732 aaKnown RBP8.6□□□□□ -1.03
CDC27-216ENST00000574304 GLB1P16278 677 aa8.6□□□□□ -1.03
CDC27-216ENST00000574304 EAPPQ56P03 285 aaPredicted RBP8.6□□□□□ -1.03
CDC27-216ENST00000574304 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
CDC27-216ENST00000574304 TP53INP1Q96A56 240 aa8.6□□□□□ -1.03
CDC27-216ENST00000574304 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
CDC27-216ENST00000574304 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
CDC27-216ENST00000574304 GIPC1O14908 333 aa8.59□□□□□ -1.03
CDC27-216ENST00000574304 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
CDC27-216ENST00000574304 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CDC27-216ENST00000574304 OSBPL7Q9BZF2 842 aa8.59□□□□□ -1.03
CDC27-216ENST00000574304 LOC100289279A0A1B0GTE1 492 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
CDC27-216ENST00000574304 FGD1P98174 961 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 CEP41Q9BYV8 373 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 SRCIN1Q9C0H9 1055 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 NRSN2Q9GZP1 204 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 RNF208Q9H0X6 261 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
CDC27-216ENST00000574304 CYP11A1P05108 521 aa8.57□□□□□ -1.04
CDC27-216ENST00000574304 GSTT1P30711 240 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms