RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
USP43-204ENST00000573955 ZNF500O60304 480 aaPredicted RBP18.88■□□□□ 0.61
USP43-204ENST00000573955 KRT32Q14532 448 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 CCDC102BQ68D86 513 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
USP43-204ENST00000573955 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
USP43-204ENST00000573955 STX6O43752 255 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 Q6ZUG5 572 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 GNPATO15228 680 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 IDH1O75874 414 aaKnown RBP18.87■□□□□ 0.61
USP43-204ENST00000573955 TRIM37O94972 964 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
USP43-204ENST00000573955 HAND2P61296 217 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
USP43-204ENST00000573955 ERFEQ4G0M1 354 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 CCDC152Q4G0S7 254 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 RBM27Q9P2N5 1060 aaKnown RBP18.87■□□□□ 0.61
USP43-204ENST00000573955 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
USP43-204ENST00000573955 C3orf67Q6ZVT6 689 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 GPT2Q8TD30 523 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 DSCC1Q9BVC3 393 aa18.87■□□□□ 0.61
USP43-204ENST00000573955 BTAF1O14981 1849 aa18.86■□□□□ 0.61
USP43-204ENST00000573955 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
USP43-204ENST00000573955 MROH5Q6ZUA9 1318 aa18.86■□□□□ 0.61
USP43-204ENST00000573955 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
USP43-204ENST00000573955 ATRNO75882 1429 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
USP43-204ENST00000573955 ANKRD1Q15327 319 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 SLC9C2Q5TAH2 1124 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 LPIN2Q92539 896 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 BRF1Q92994 677 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 RREB1Q92766 1687 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
USP43-204ENST00000573955 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
USP43-204ENST00000573955 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 AK7Q96M32 723 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 LRRC4BQ9NT99 713 aa18.85■□□□□ 0.61
USP43-204ENST00000573955 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
USP43-204ENST00000573955 LRRFIP1Q32MZ4 808 aaKnown RBP18.84■□□□□ 0.61
USP43-204ENST00000573955 HS1BP3Q53T59 392 aa18.84■□□□□ 0.61
USP43-204ENST00000573955 COL5A3P25940 1745 aaPredicted RBP18.84■□□□□ 0.61
USP43-204ENST00000573955 APPBP2Q92624 585 aa18.84■□□□□ 0.61
USP43-204ENST00000573955 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
USP43-204ENST00000573955 DDX60Q8IY21 1712 aaKnown RBP18.83■□□□□ 0.61
USP43-204ENST00000573955 SPEF2Q9C093 1822 aa18.83■□□□□ 0.61
USP43-204ENST00000573955 E7EWF7 191 aa18.83■□□□□ 0.61
USP43-204ENST00000573955 FOXP2O15409 715 aa18.83■□□□□ 0.61
USP43-204ENST00000573955 ZFYP08048 801 aaPredicted RBP18.83■□□□□ 0.61
USP43-204ENST00000573955 SLC5A1P13866 664 aa18.83■□□□□ 0.61
USP43-204ENST00000573955 FGFR2P21802 821 aa18.83■□□□□ 0.61
USP43-204ENST00000573955 GPAA1O43292 621 aa18.83■□□□□ 0.6
USP43-204ENST00000573955 COL4A1P02462 1669 aa18.83■□□□□ 0.6
USP43-204ENST00000573955 IRX5P78411 483 aaPredicted RBP18.83■□□□□ 0.6
USP43-204ENST00000573955 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP43-204ENST00000573955 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.6
USP43-204ENST00000573955 CNPY2Q9Y2B0 182 aa18.83■□□□□ 0.6
USP43-204ENST00000573955 WTIPA6NIX2 430 aaPredicted RBP18.82■□□□□ 0.6
USP43-204ENST00000573955 WWC3Q9ULE0 1092 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
USP43-204ENST00000573955 AKAP11Q9UKA4 1901 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 F13A1P00488 732 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 BCAMP50895 628 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 CHRNDQ07001 517 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 SLC20A2Q08357 652 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
USP43-204ENST00000573955 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 PPFIA3O75145 1194 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 GADD45BO75293 160 aaPredicted RBP18.81■□□□□ 0.6
USP43-204ENST00000573955 RASGRF1Q13972 1273 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
USP43-204ENST00000573955 CLEC4GQ6UXB4 293 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 MYO5AQ9Y4I1 1855 aaKnown RBP18.81■□□□□ 0.6
USP43-204ENST00000573955 CNTNAP4Q9C0A0 1308 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 JAK2O60674 1132 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 FGAP02671 866 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 USP48Q86UV5 1035 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 FERMT3Q86UX7 667 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 MTMR6Q9Y217 621 aa18.81■□□□□ 0.6
USP43-204ENST00000573955 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
USP43-204ENST00000573955 ADD2P35612 726 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 DHX32Q7L7V1 743 aaKnown RBP18.8■□□□□ 0.6
USP43-204ENST00000573955 SPATA5Q8NB90 893 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 TCHHQ07283 1943 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 LRP5O75197 1615 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 UQCRFS1P1P0C7P4 283 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 KRT27Q7Z3Y8 459 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 DDX11Q96FC9 970 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
USP43-204ENST00000573955 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
USP43-204ENST00000573955 TAF1P21675 1872 aa18.8■□□□□ 0.6
USP43-204ENST00000573955 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 FIBPO43427 364 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
USP43-204ENST00000573955 APPP05067 770 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms