RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 GGA3Q9NZ52 723 aa34.51■■■■□ 3.12
SCARF1-207ENST00000573867 CST9Q5W186 159 aa34.5■■■■□ 3.11
SCARF1-207ENST00000573867 USP48Q86UV5 1035 aa34.5■■■■□ 3.11
SCARF1-207ENST00000573867 SLC5A1P13866 664 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 FKBP1AP62942 108 aaKnown RBP34.49■■■■□ 3.11
SCARF1-207ENST00000573867 POLA2Q14181 598 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 ATP2B3Q16720 1220 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 NBPF9Q3BBW0 867 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 CAVIN4Q5BKX8 364 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 CDC37L1Q7L3B6 337 aa34.49■■■■□ 3.11
SCARF1-207ENST00000573867 ADM5C9JUS6 153 aa34.48■■■■□ 3.11
SCARF1-207ENST00000573867 VPS37DQ86XT2 251 aa34.48■■■■□ 3.11
SCARF1-207ENST00000573867 OGFOD1Q8N543 542 aa34.48■■■■□ 3.11
SCARF1-207ENST00000573867 ATP8B2P98198 1209 aa34.47■■■■□ 3.11
SCARF1-207ENST00000573867 C20orf194Q5TEA3 1177 aa34.47■■■■□ 3.11
SCARF1-207ENST00000573867 COG6Q9Y2V7 657 aa34.47■■■■□ 3.11
SCARF1-207ENST00000573867 F8W031 263 aaPredicted RBP34.46■■■■□ 3.11
SCARF1-207ENST00000573867 MS4A1P11836 297 aa34.46■■■■□ 3.11
SCARF1-207ENST00000573867 TFCP2Q12800 502 aa34.46■■■■□ 3.11
SCARF1-207ENST00000573867 MVPQ14764 893 aaKnown RBP34.46■■■■□ 3.11
SCARF1-207ENST00000573867 ANGEL2Q5VTE6 544 aaKnown RBP34.46■■■■□ 3.11
SCARF1-207ENST00000573867 KRT26Q7Z3Y9 468 aa34.46■■■■□ 3.11
SCARF1-207ENST00000573867 SSH3Q8TE77 659 aa34.46■■■■□ 3.11
SCARF1-207ENST00000573867 ZBED3Q96IU2 234 aaPredicted RBP34.46■■■■□ 3.11
SCARF1-207ENST00000573867 TRPM7Q96QT4 1865 aa34.46■■■■□ 3.11
SCARF1-207ENST00000573867 WNT10BO00744 389 aa34.45■■■■□ 3.11
SCARF1-207ENST00000573867 GRIK5Q16478 980 aa34.45■■■■□ 3.11
SCARF1-207ENST00000573867 DCPSQ96C86 337 aaKnown RBP34.45■■■■□ 3.11
SCARF1-207ENST00000573867 PCDHAC2Q9Y5I4 1007 aa34.45■■■■□ 3.11
SCARF1-207ENST00000573867 ARAP2Q8WZ64 1704 aa34.44■■■■□ 3.1
SCARF1-207ENST00000573867 POLR2AP24928 1970 aaKnown RBP34.44■■■■□ 3.1
SCARF1-207ENST00000573867 ADORA1P30542 326 aa34.44■■■■□ 3.1
SCARF1-207ENST00000573867 CHAF1AQ13111 956 aaPredicted RBP34.44■■■■□ 3.1
SCARF1-207ENST00000573867 MFSD14BQ5SR56 506 aa34.44■■■■□ 3.1
SCARF1-207ENST00000573867 MKRN1Q9UHC7 482 aaKnown RBP34.44■■■■□ 3.1
SCARF1-207ENST00000573867 HDAC9Q9UKV0 1011 aa34.44■■■■□ 3.1
SCARF1-207ENST00000573867 COL1A1P02452 1464 aaPredicted RBP34.44■■■■□ 3.1
SCARF1-207ENST00000573867 SCAF8Q9UPN6 1271 aaKnown RBP34.43■■■■□ 3.1
SCARF1-207ENST00000573867 CELF2O95319 508 aaKnown RBP34.42■■■■□ 3.1
SCARF1-207ENST00000573867 MMP14P50281 582 aa34.42■■■■□ 3.1
SCARF1-207ENST00000573867 CEP85Q6P2H3 762 aa34.42■■■■□ 3.1
SCARF1-207ENST00000573867 CNTNAP1P78357 1384 aa34.41■■■■□ 3.1
SCARF1-207ENST00000573867 TIMM10P62072 90 aa34.41■■■■□ 3.1
SCARF1-207ENST00000573867 AOX1Q06278 1338 aa34.4■■■■□ 3.1
SCARF1-207ENST00000573867 PITPNM2Q9BZ72 1349 aa34.39■■■■□ 3.1
SCARF1-207ENST00000573867 FRAT2O75474 233 aaPredicted RBP34.39■■■■□ 3.1
SCARF1-207ENST00000573867 PHKA1P46020 1223 aa34.39■■■■□ 3.1
SCARF1-207ENST00000573867 ZNF408Q9H9D4 720 aa34.39■■■■□ 3.1
SCARF1-207ENST00000573867 PCNTO95613 3336 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 A0A1B0GUL7 405 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 G3BP1Q13283 466 aaKnown RBP eCLIP34.38■■■■□ 3.09
SCARF1-207ENST00000573867 SULF1Q8IWU6 871 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 JMYQ8N9B5 988 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 MTMR14Q8NCE2 650 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 ZBTB40Q9NUA8 1239 aa34.38■■■■□ 3.09
SCARF1-207ENST00000573867 CFAP100Q494V2 611 aa34.37■■■■□ 3.09
SCARF1-207ENST00000573867 ABT1Q9ULW3 272 aaKnown RBP34.37■■■■□ 3.09
SCARF1-207ENST00000573867 DDX19BQ9UMR2 479 aa34.37■■■■□ 3.09
SCARF1-207ENST00000573867 RASSF10A6NK89 507 aa34.36■■■■□ 3.09
SCARF1-207ENST00000573867 PDE3AQ14432 1141 aa34.36■■■■□ 3.09
SCARF1-207ENST00000573867 DLGAP5Q15398 846 aa34.36■■■■□ 3.09
SCARF1-207ENST00000573867 TTF2Q9UNY4 1162 aaKnown RBP34.36■■■■□ 3.09
SCARF1-207ENST00000573867 TLL2Q9Y6L7 1015 aa34.35■■■■□ 3.09
SCARF1-207ENST00000573867 SURF6O75683 361 aaKnown RBP34.34■■■■□ 3.09
SCARF1-207ENST00000573867 CCDC102BQ68D86 513 aa34.34■■■■□ 3.09
SCARF1-207ENST00000573867 CDCA5Q96FF9 252 aa34.34■■■■□ 3.09
SCARF1-207ENST00000573867 XAGE2Q96GT9 111 aa34.34■■■■□ 3.09
SCARF1-207ENST00000573867 PRMT6Q96LA8 375 aaPredicted RBP34.34■■■■□ 3.09
SCARF1-207ENST00000573867 AKAP2Q9Y2D5 859 aa34.34■■■■□ 3.09
SCARF1-207ENST00000573867 NOP58Q9Y2X3 529 aaKnown RBP34.34■■■■□ 3.09
SCARF1-207ENST00000573867 SPDYE2BA6NHP3 402 aa34.33■■■■□ 3.09
SCARF1-207ENST00000573867 SPDYE6P0CI01 402 aa34.33■■■■□ 3.09
SCARF1-207ENST00000573867 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.33■■■■□ 3.09
SCARF1-207ENST00000573867 TBC1D22AQ8WUA7 517 aa34.33■■■■□ 3.09
SCARF1-207ENST00000573867 MYH13Q9UKX3 1938 aa34.32■■■■□ 3.08
SCARF1-207ENST00000573867 VEGFBP49765 207 aa34.32■■■■□ 3.08
SCARF1-207ENST00000573867 DEFB115Q30KQ5 88 aa34.31■■■■□ 3.08
SCARF1-207ENST00000573867 PRAMEF18Q5VWM3 479 aa34.31■■■■□ 3.08
SCARF1-207ENST00000573867 SAPCD2Q86UD0 394 aa34.31■■■■□ 3.08
SCARF1-207ENST00000573867 SIRT2Q8IXJ6 389 aa34.3■■■■□ 3.08
SCARF1-207ENST00000573867 SERPINA10Q9UK55 444 aa34.3■■■■□ 3.08
SCARF1-207ENST00000573867 NEUROD6Q96NK8 337 aa34.29■■■■□ 3.08
SCARF1-207ENST00000573867 GNL3LQ9NVN8 582 aaKnown RBP34.29■■■■□ 3.08
SCARF1-207ENST00000573867 CLRN2A0PK11 232 aa34.28■■■■□ 3.08
SCARF1-207ENST00000573867 ZBTB22O15209 634 aa34.28■■■■□ 3.08
SCARF1-207ENST00000573867 CRKP46108 304 aa34.28■■■■□ 3.08
SCARF1-207ENST00000573867 RBM5P52756 815 aaKnown RBP eCLIP34.28■■■■□ 3.08
SCARF1-207ENST00000573867 OS9Q13438 667 aaPredicted RBP34.28■■■■□ 3.08
SCARF1-207ENST00000573867 RASGRF1Q13972 1273 aa34.28■■■■□ 3.08
SCARF1-207ENST00000573867 WDR66Q8TBY9 1149 aa34.28■■■■□ 3.08
SCARF1-207ENST00000573867 ECM29Q5VYK3 1845 aa34.27■■■■□ 3.08
SCARF1-207ENST00000573867 SEMA3EO15041 775 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 TNNI3KQ59H18 835 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 APOBEC3FQ8IUX4 373 aaKnown RBP34.26■■■■□ 3.08
SCARF1-207ENST00000573867 GBA2Q9HCG7 927 aaPredicted RBP34.26■■■■□ 3.08
SCARF1-207ENST00000573867 GPR108Q9NPR9 543 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 DENND2AQ9ULE3 1009 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 EXOC6BQ9Y2D4 811 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 FPGT-TNNI3KV9GXZ4 949 aa34.26■■■■□ 3.08
SCARF1-207ENST00000573867 CYP4F22Q6NT55 531 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms