RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 SEMA3EO15041 775 aa34.74■■■■□ 3.15
CTDNEP1-208ENST00000573600 FAM84BQ96KN1 310 aaPredicted RBP34.74■■■■□ 3.15
CTDNEP1-208ENST00000573600 ALDH8A1Q9H2A2 487 aaPredicted RBP34.74■■■■□ 3.15
CTDNEP1-208ENST00000573600 ZNF532Q9HCE3 1301 aa34.74■■■■□ 3.15
CTDNEP1-208ENST00000573600 NRXN2Q9P2S2 1712 aa34.73■■■■□ 3.15
CTDNEP1-208ENST00000573600 NOL8Q76FK4 1167 aaKnown RBP34.73■■■■□ 3.15
CTDNEP1-208ENST00000573600 FBXO33Q7Z6M2 555 aa34.73■■■■□ 3.15
CTDNEP1-208ENST00000573600 DENND2AQ9ULE3 1009 aa34.73■■■■□ 3.15
CTDNEP1-208ENST00000573600 GPAA1O43292 621 aa34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 CPA1P15085 419 aa34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 WWC3Q9ULE0 1092 aa34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 TCRBV5S4A2TA0A5A2 114 aa34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 KLRG2A4D1S0 409 aaPredicted RBP34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 ZBTB22O15209 634 aa34.72■■■■□ 3.15
CTDNEP1-208ENST00000573600 RPS6KB1P23443 525 aa34.71■■■■□ 3.15
CTDNEP1-208ENST00000573600 RAB3GAP1Q15042 981 aa34.71■■■■□ 3.15
CTDNEP1-208ENST00000573600 ZSCAN31Q96LW9 406 aaPredicted RBP34.71■■■■□ 3.15
CTDNEP1-208ENST00000573600 NEK1Q96PY6 1258 aa34.71■■■■□ 3.15
CTDNEP1-208ENST00000573600 LEMD3Q9Y2U8 911 aa34.71■■■■□ 3.15
CTDNEP1-208ENST00000573600 HOXA10P31260 410 aaPredicted RBP34.7■■■■□ 3.15
CTDNEP1-208ENST00000573600 ANKRD1Q15327 319 aa34.7■■■■□ 3.15
CTDNEP1-208ENST00000573600 PNPLA7Q6ZV29 1317 aa34.7■■■■□ 3.15
CTDNEP1-208ENST00000573600 TAF6LQ9Y6J9 622 aa34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 PDS5AQ29RF7 1337 aaKnown RBP34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 WTIPA6NIX2 430 aaPredicted RBP34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 FRAT2O75474 233 aaPredicted RBP34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 NUCB2P80303 420 aa34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 ZGPATQ8N5A5 531 aaKnown RBP34.69■■■■□ 3.14
CTDNEP1-208ENST00000573600 MYH13Q9UKX3 1938 aa34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 HMGB1P09429 215 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 HIBADHP31937 336 aaKnown RBP34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 XDHP47989 1333 aa34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 MAGEB6Q8N7X4 407 aa34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 CRAMP1Q96RY5 1269 aa34.68■■■■□ 3.14
CTDNEP1-208ENST00000573600 BBOX1O75936 387 aa34.67■■■■□ 3.14
CTDNEP1-208ENST00000573600 SH2B1Q9NRF2 756 aaPredicted RBP34.67■■■■□ 3.14
CTDNEP1-208ENST00000573600 ANKIB1Q9P2G1 1089 aa34.67■■■■□ 3.14
CTDNEP1-208ENST00000573600 LRP2BPQ9P2M1 347 aa34.67■■■■□ 3.14
CTDNEP1-208ENST00000573600 CAMKK2Q96RR4 588 aa34.67■■■■□ 3.14
CTDNEP1-208ENST00000573600 BRIP1Q9BX63 1249 aa34.66■■■■□ 3.14
CTDNEP1-208ENST00000573600 IQSEC3Q9UPP2 1182 aaPredicted RBP34.66■■■■□ 3.14
CTDNEP1-208ENST00000573600 FOXP2O15409 715 aa34.65■■■■□ 3.14
CTDNEP1-208ENST00000573600 IMMTQ16891 758 aaKnown RBP34.65■■■■□ 3.14
CTDNEP1-208ENST00000573600 AIDAQ96BJ3 306 aa34.65■■■■□ 3.14
CTDNEP1-208ENST00000573600 ANKRD31Q8N7Z5 1873 aa34.65■■■■□ 3.14
CTDNEP1-208ENST00000573600 TMC4Q7Z404 712 aa34.64■■■■□ 3.14
CTDNEP1-208ENST00000573600 PARP3Q9Y6F1 533 aa34.64■■■■□ 3.14
CTDNEP1-208ENST00000573600 LAMA4Q16363 1823 aa34.64■■■■□ 3.14
CTDNEP1-208ENST00000573600 IRS2Q9Y4H2 1338 aa34.64■■■■□ 3.14
CTDNEP1-208ENST00000573600 COL1A1P02452 1464 aaPredicted RBP34.64■■■■□ 3.14
CTDNEP1-208ENST00000573600 QSER1Q2KHR3 1735 aa34.63■■■■□ 3.13
CTDNEP1-208ENST00000573600 FGAP02671 866 aa34.63■■■■□ 3.13
CTDNEP1-208ENST00000573600 KLRK1P26718 216 aa34.63■■■■□ 3.13
CTDNEP1-208ENST00000573600 EZH2Q15910 746 aaKnown RBP34.63■■■■□ 3.13
CTDNEP1-208ENST00000573600 C15orf52Q6ZUT6 534 aaKnown RBP34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 TNPO1Q92973 898 aaKnown RBP34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 STRBPQ96SI9 672 aaKnown RBP34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 E7EWF7 191 aa34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 EN1Q05925 392 aaPredicted RBP34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 SLC15A2Q16348 729 aa34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 STOX1Q6ZVD7 989 aa34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 STK32BQ9NY57 414 aa34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 ABCF2Q9UG63 623 aa34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.61■■■■□ 3.13
CTDNEP1-208ENST00000573600 MMP10P09238 476 aa34.6■■■■□ 3.13
CTDNEP1-208ENST00000573600 ATP2B4P23634 1241 aa34.59■■■■□ 3.13
CTDNEP1-208ENST00000573600 TTLL5Q6EMB2 1281 aa34.59■■■■□ 3.13
CTDNEP1-208ENST00000573600 ZMYM6O95789 1325 aa34.59■■■■□ 3.13
CTDNEP1-208ENST00000573600 GNAT2P19087 354 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 DHX32Q7L7V1 743 aaKnown RBP34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 RAI14Q9P0K7 980 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 LRRC37AA6NMS7 1700 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 PDE6BP35913 854 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 ALX1Q15699 326 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 GBP4Q96PP9 640 aa34.58■■■■□ 3.13
CTDNEP1-208ENST00000573600 ZNF213O14771 459 aa34.57■■■■□ 3.12
CTDNEP1-208ENST00000573600 GPSM2P81274 684 aa34.57■■■■□ 3.12
CTDNEP1-208ENST00000573600 TOB2Q14106 344 aaPredicted RBP34.57■■■■□ 3.12
CTDNEP1-208ENST00000573600 TMED8Q6PL24 325 aaPredicted RBP34.57■■■■□ 3.12
CTDNEP1-208ENST00000573600 LARP6Q9BRS8 491 aaKnown RBP34.57■■■■□ 3.12
CTDNEP1-208ENST00000573600 PATL2C9JE40 543 aaKnown RBP34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 IGSF3O75054 1194 aa34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 MBD4O95243 580 aa34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 SF3B2Q13435 895 aaKnown RBP34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 COL9A3Q14050 684 aaPredicted RBP34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 PODXL2Q9NZ53 605 aa34.56■■■■□ 3.12
CTDNEP1-208ENST00000573600 APPP05067 770 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 CYP7A1P22680 504 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 MCM4P33991 863 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 ZNF804AQ7Z570 1209 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 TXNRD3Q86VQ6 643 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 TPCN1Q9ULQ1 816 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 NPR1P16066 1061 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 ME3Q16798 604 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 TCEANC2Q96MN5 208 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 ANO8Q9HCE9 1232 aaPredicted RBP34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 GGA1Q9UJY5 639 aa34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 NSFL1CQ9UNZ2 370 aaKnown RBP34.55■■■■□ 3.12
CTDNEP1-208ENST00000573600 CACNA1SQ13698 1873 aa34.54■■■■□ 3.12
CTDNEP1-208ENST00000573600 A0A0G2JLW4 131 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms