RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 FOXD4L6Q3SYB3 417 aaPredicted RBP8.38□□□□□ -1.07
CDC27-215ENST00000573550 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 FOXD4L3Q6VB84 417 aaPredicted RBP8.38□□□□□ -1.07
CDC27-215ENST00000573550 KLHL23Q8NBE8 558 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 SETDB2Q96T68 719 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
CDC27-215ENST00000573550 ANKRD33BA6NCL7 494 aa8.37□□□□□ -1.07
CDC27-215ENST00000573550 GADD45BO75293 160 aaPredicted RBP8.37□□□□□ -1.07
CDC27-215ENST00000573550 HGSNATQ68CP4 663 aa8.37□□□□□ -1.07
CDC27-215ENST00000573550 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
CDC27-215ENST00000573550 KLHDC7BQ96G42 594 aa8.37□□□□□ -1.07
CDC27-215ENST00000573550 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
CDC27-215ENST00000573550 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
CDC27-215ENST00000573550 ADAM11O75078 769 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 ITPKAP23677 461 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 CD68P34810 354 aaPredicted RBP8.36□□□□□ -1.07
CDC27-215ENST00000573550 GATA4P43694 442 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 IKBKEQ14164 716 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDC27-215ENST00000573550 FOXD4L4Q8WXT5 416 aaPredicted RBP8.36□□□□□ -1.07
CDC27-215ENST00000573550 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
CDC27-215ENST00000573550 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 NLRP2Q9NX02 1062 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 USP21Q9UK80 565 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
CDC27-215ENST00000573550 WISP1O95388 367 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
CDC27-215ENST00000573550 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 SLC7A3Q8WY07 619 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
CDC27-215ENST00000573550 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 SOX17Q9H6I2 414 aaPredicted RBP8.35□□□□□ -1.07
CDC27-215ENST00000573550 TRAK1Q9UPV9 953 aa8.35□□□□□ -1.07
CDC27-215ENST00000573550 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 DDX3YO15523 660 aaKnown RBP8.34□□□□□ -1.07
CDC27-215ENST00000573550 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
CDC27-215ENST00000573550 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 COL19A1Q14993 1142 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 ALG1LQ6GMV1 187 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
CDC27-215ENST00000573550 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
CDC27-215ENST00000573550 NOS3P29474 1203 aa8.33□□□□□ -1.08
CDC27-215ENST00000573550 PCDH1Q08174 1060 aa8.33□□□□□ -1.08
CDC27-215ENST00000573550 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
CDC27-215ENST00000573550 ZNF423Q2M1K9 1284 aa8.33□□□□□ -1.08
CDC27-215ENST00000573550 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.33□□□□□ -1.08
CDC27-215ENST00000573550 WFDC12Q8WWY7 111 aa8.33□□□□□ -1.08
CDC27-215ENST00000573550 ZBTB7CA1YPR0 619 aa8.32□□□□□ -1.08
CDC27-215ENST00000573550 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
CDC27-215ENST00000573550 ATP2B2Q01814 1243 aa8.32□□□□□ -1.08
CDC27-215ENST00000573550 SSBP4Q9BWG4 385 aaPredicted RBP8.32□□□□□ -1.08
CDC27-215ENST00000573550 ALX3O95076 343 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 B3GALT4O96024 378 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
CDC27-215ENST00000573550 ARL4DP49703 201 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 NLRP12P59046 1061 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 Q6ZS46 218 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 KIAA1211Q6ZU35 1233 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
CDC27-215ENST00000573550 UBASH3BQ8TF42 649 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 NRSN2Q9GZP1 204 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 AKTIPQ9H8T0 292 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 TPSG1Q9NRR2 321 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 CCDC180Q9P1Z9 1646 aa8.31□□□□□ -1.08
CDC27-215ENST00000573550 FCGRTP55899 365 aa8.3□□□□□ -1.08
CDC27-215ENST00000573550 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
CDC27-215ENST00000573550 ACAD11Q709F0 780 aa8.3□□□□□ -1.08
CDC27-215ENST00000573550 OSBPL7Q9BZF2 842 aa8.3□□□□□ -1.08
CDC27-215ENST00000573550 FAAP100Q0VG06 881 aa8.29□□□□□ -1.08
CDC27-215ENST00000573550 DOC2BQ14184 412 aa8.29□□□□□ -1.08
CDC27-215ENST00000573550 EAPPQ56P03 285 aaPredicted RBP8.29□□□□□ -1.08
CDC27-215ENST00000573550 RPS26P11Q5JNZ5 115 aaPredicted RBP8.29□□□□□ -1.08
CDC27-215ENST00000573550 FBXO33Q7Z6M2 555 aa8.29□□□□□ -1.08
CDC27-215ENST00000573550 C3orf58Q8NDZ4 430 aa8.29□□□□□ -1.08
CDC27-215ENST00000573550 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
CDC27-215ENST00000573550 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
CDC27-215ENST00000573550 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
CDC27-215ENST00000573550 GSTM4Q03013 218 aa8.28□□□□□ -1.08
CDC27-215ENST00000573550 DTHD1Q6ZMT9 781 aa8.28□□□□□ -1.08
CDC27-215ENST00000573550 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
CDC27-215ENST00000573550 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
CDC27-215ENST00000573550 SRCIN1Q9C0H9 1055 aa8.28□□□□□ -1.08
CDC27-215ENST00000573550 LOC100289279A0A1B0GTE1 492 aa8.27□□□□□ -1.09
CDC27-215ENST00000573550 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
CDC27-215ENST00000573550 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
CDC27-215ENST00000573550 GIPC1O14908 333 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 DLGAP3O95886 979 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 ERCC3P19447 782 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 GNA15P30679 374 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 DUSP9Q99956 384 aaKnown RBP8.26□□□□□ -1.09
CDC27-215ENST00000573550 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 C12orf49Q9H741 205 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
CDC27-215ENST00000573550 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms