RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
LINC01996-201ENST00000573270 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
LINC01996-201ENST00000573270 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
LINC01996-201ENST00000573270 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
LINC01996-201ENST00000573270 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
LINC01996-201ENST00000573270 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
LINC01996-201ENST00000573270 YDJCA8MPS7 323 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 IL1R1P14778 569 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 ATP5JP18859 108 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 GNL3LQ9NVN8 582 aaKnown RBP16.49■□□□□ 0.23
LINC01996-201ENST00000573270 RNF181Q9P0P0 153 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
LINC01996-201ENST00000573270 ERC2O15083 957 aa16.48■□□□□ 0.23
LINC01996-201ENST00000573270 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 LMNB1P20700 586 aa16.48■□□□□ 0.23
LINC01996-201ENST00000573270 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 EDC3Q96F86 508 aaKnown RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
LINC01996-201ENST00000573270 VPS33BQ9H267 617 aa16.48■□□□□ 0.23
LINC01996-201ENST00000573270 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
LINC01996-201ENST00000573270 SEMA3EO15041 775 aa16.47■□□□□ 0.23
LINC01996-201ENST00000573270 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
LINC01996-201ENST00000573270 ZAP70P43403 619 aa16.47■□□□□ 0.23
LINC01996-201ENST00000573270 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
LINC01996-201ENST00000573270 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
LINC01996-201ENST00000573270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01996-201ENST00000573270 UTRNP46939 3433 aa16.47■□□□□ 0.23
LINC01996-201ENST00000573270 PDS5AQ29RF7 1337 aaKnown RBP16.46■□□□□ 0.23
LINC01996-201ENST00000573270 ZNF541Q9H0D2 1346 aa16.46■□□□□ 0.23
LINC01996-201ENST00000573270 HAUS7Q99871 368 aa16.46■□□□□ 0.23
LINC01996-201ENST00000573270 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
LINC01996-201ENST00000573270 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
LINC01996-201ENST00000573270 GOLIM4O00461 696 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 GTF2IP78347 998 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 ANTXR1Q9H6X2 564 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
LINC01996-201ENST00000573270 RAD17O75943 681 aa16.44■□□□□ 0.22
LINC01996-201ENST00000573270 PODNQ7Z5L7 613 aa16.44■□□□□ 0.22
LINC01996-201ENST00000573270 MXD3Q9BW11 206 aa16.44■□□□□ 0.22
LINC01996-201ENST00000573270 PIH1D3Q9NQM4 214 aaKnown RBP16.44■□□□□ 0.22
LINC01996-201ENST00000573270 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
LINC01996-201ENST00000573270 ZBTB22O15209 634 aa16.43■□□□□ 0.22
LINC01996-201ENST00000573270 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
LINC01996-201ENST00000573270 MYH2Q9UKX2 1941 aa16.43■□□□□ 0.22
LINC01996-201ENST00000573270 USP17L3A6NCW0 530 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 USP17L4A6NCW7 530 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 PSMD14O00487 310 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 GRIK5Q16478 980 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 DACT2Q5SW24 774 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 USP17L1Q7RTZ2 530 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
LINC01996-201ENST00000573270 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 FZD9O00144 591 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 PRDX5P30044 214 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 CXCL9Q07325 125 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
LINC01996-201ENST00000573270 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 RFX7Q2KHR2 1363 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 SDSP20132 328 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
LINC01996-201ENST00000573270 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 STRIP1Q5VSL9 837 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 CNTROBQ8N137 903 aa16.4■□□□□ 0.22
LINC01996-201ENST00000573270 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
LINC01996-201ENST00000573270 TTF1Q15361 905 aaPredicted RBP16.39■□□□□ 0.21
LINC01996-201ENST00000573270 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
LINC01996-201ENST00000573270 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
LINC01996-201ENST00000573270 TBC1D22AQ8WUA7 517 aa16.39■□□□□ 0.21
LINC01996-201ENST00000573270 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
LINC01996-201ENST00000573270 GJA3Q9Y6H8 435 aa16.39■□□□□ 0.21
LINC01996-201ENST00000573270 CDK5RAP2Q96SN8 1893 aa16.39■□□□□ 0.21
LINC01996-201ENST00000573270 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
LINC01996-201ENST00000573270 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
LINC01996-201ENST00000573270 CHGBP05060 677 aa16.38■□□□□ 0.21
LINC01996-201ENST00000573270 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
LINC01996-201ENST00000573270 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
LINC01996-201ENST00000573270 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
LINC01996-201ENST00000573270 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
LINC01996-201ENST00000573270 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
LINC01996-201ENST00000573270 LDHBP07195 334 aaKnown RBP16.37■□□□□ 0.21
LINC01996-201ENST00000573270 VIL1P09327 827 aaKnown RBP16.37■□□□□ 0.21
LINC01996-201ENST00000573270 FKBP1AP62942 108 aaKnown RBP16.37■□□□□ 0.21
LINC01996-201ENST00000573270 TNIP1Q15025 636 aa16.37■□□□□ 0.21
LINC01996-201ENST00000573270 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms