RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SURF6O75683 361 aaKnown RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 VIL1P09327 827 aaKnown RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 G3BP1Q13283 466 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHD3-215ENST00000572750 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 EAPPQ56P03 285 aaPredicted RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 MAP1SQ66K74 1059 aaPredicted RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 RSBN1LQ6PCB5 846 aaPredicted RBP19.57■□□□□ 0.72
CHD3-215ENST00000572750 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
CHD3-215ENST00000572750 LPIN2Q92539 896 aa19.57■□□□□ 0.72
CHD3-215ENST00000572750 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
CHD3-215ENST00000572750 IL1R1P14778 569 aa19.56■□□□□ 0.72
CHD3-215ENST00000572750 GTF2IP78347 998 aa19.56■□□□□ 0.72
CHD3-215ENST00000572750 FMR1Q06787 632 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHD3-215ENST00000572750 DACT2Q5SW24 774 aa19.56■□□□□ 0.72
CHD3-215ENST00000572750 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
CHD3-215ENST00000572750 MICALL2Q8IY33 904 aa19.56■□□□□ 0.72
CHD3-215ENST00000572750 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
CHD3-215ENST00000572750 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
CHD3-215ENST00000572750 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
CHD3-215ENST00000572750 SASH1O94885 1247 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 RPS12P25398 132 aaKnown RBP19.55■□□□□ 0.72
CHD3-215ENST00000572750 ADORA1P30542 326 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 BCAMP50895 628 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 CAVIN4Q5BKX8 364 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 STRIP1Q5VSL9 837 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 MCOLN1Q9GZU1 580 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 EXOC6BQ9Y2D4 811 aa19.55■□□□□ 0.72
CHD3-215ENST00000572750 TTLL5Q6EMB2 1281 aa19.54■□□□□ 0.72
CHD3-215ENST00000572750 FBXO33Q7Z6M2 555 aa19.54■□□□□ 0.72
CHD3-215ENST00000572750 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
CHD3-215ENST00000572750 CNTROBQ8N137 903 aa19.54■□□□□ 0.72
CHD3-215ENST00000572750 CNOT7Q9UIV1 285 aaKnown RBP19.54■□□□□ 0.72
CHD3-215ENST00000572750 NOP58Q9Y2X3 529 aaKnown RBP19.54■□□□□ 0.72
CHD3-215ENST00000572750 A0A1B0GUL7 405 aa19.53■□□□□ 0.72
CHD3-215ENST00000572750 HMMRO75330 724 aa19.53■□□□□ 0.72
CHD3-215ENST00000572750 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
CHD3-215ENST00000572750 TRPM4Q8TD43 1214 aa19.53■□□□□ 0.72
CHD3-215ENST00000572750 DPF2Q92785 391 aa19.53■□□□□ 0.72
CHD3-215ENST00000572750 ADARB2Q9NS39 739 aaKnown RBP19.53■□□□□ 0.72
CHD3-215ENST00000572750 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
CHD3-215ENST00000572750 AGBL3Q8NEM8 1001 aa19.52■□□□□ 0.72
CHD3-215ENST00000572750 GMLQ99445 158 aa19.52■□□□□ 0.72
CHD3-215ENST00000572750 ABT1Q9ULW3 272 aaKnown RBP19.52■□□□□ 0.72
CHD3-215ENST00000572750 CLEC11AQ9Y240 323 aa19.52■□□□□ 0.72
CHD3-215ENST00000572750 AKAP2Q9Y2D5 859 aa19.52■□□□□ 0.72
CHD3-215ENST00000572750 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 EGFRP00533 1210 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 PHKA1P46020 1223 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 TIMM10P62072 90 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
CHD3-215ENST00000572750 CYP4F22Q6NT55 531 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 SAMD7Q7Z3H4 446 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 PNMA8AQ86V59 439 aaPredicted RBP19.51■□□□□ 0.71
CHD3-215ENST00000572750 CAPNS2Q96L46 248 aa19.51■□□□□ 0.71
CHD3-215ENST00000572750 CASP8AP2Q9UKL3 1982 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 H7C1D1 291 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 FRAT2O75474 233 aaPredicted RBP19.5■□□□□ 0.71
CHD3-215ENST00000572750 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
CHD3-215ENST00000572750 KIAA0825Q8IV33 1275 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 XAGE2Q96GT9 111 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 NEUROD6Q96NK8 337 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 FAM205AQ6ZU69 1335 aa19.5■□□□□ 0.71
CHD3-215ENST00000572750 APBB1O00213 710 aa19.49■□□□□ 0.71
CHD3-215ENST00000572750 USP17L8P0C7I0 530 aa19.49■□□□□ 0.71
CHD3-215ENST00000572750 TNNI3KQ59H18 835 aa19.49■□□□□ 0.71
CHD3-215ENST00000572750 USP50Q70EL3 339 aaPredicted RBP19.49■□□□□ 0.71
CHD3-215ENST00000572750 FPGT-TNNI3KV9GXZ4 949 aa19.49■□□□□ 0.71
CHD3-215ENST00000572750 F8W031 263 aaPredicted RBP19.48■□□□□ 0.71
CHD3-215ENST00000572750 AOC2O75106 756 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
CHD3-215ENST00000572750 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
CHD3-215ENST00000572750 KIF4BQ2VIQ3 1234 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 MFSD14BQ5SR56 506 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 CCDC102BQ68D86 513 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 ERC1Q8IUD2 1116 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 PCDHB15Q9Y5E8 787 aa19.48■□□□□ 0.71
CHD3-215ENST00000572750 IRX6P78412 446 aaPredicted RBP19.47■□□□□ 0.71
CHD3-215ENST00000572750 GRM1Q13255 1194 aa19.47■□□□□ 0.71
CHD3-215ENST00000572750 RBM26Q5T8P6 1007 aaKnown RBP19.47■□□□□ 0.71
CHD3-215ENST00000572750 CST9Q5W186 159 aa19.47■□□□□ 0.71
CHD3-215ENST00000572750 ECM29Q5VYK3 1845 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 FKBP1AP62942 108 aaKnown RBP19.46■□□□□ 0.71
CHD3-215ENST00000572750 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 EXOC6Q8TAG9 804 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 IL1RAPL2Q9NP60 686 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 MYOZ2Q9NPC6 264 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 GPR108Q9NPR9 543 aa19.46■□□□□ 0.71
CHD3-215ENST00000572750 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
CHD3-215ENST00000572750 TLR7Q9NYK1 1049 aaKnown RBP19.46■□□□□ 0.71
CHD3-215ENST00000572750 RASGRF1Q13972 1273 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 GRIK5Q16478 980 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 GORABQ5T7V8 394 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 OGFOD1Q8N543 542 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 RHPN1Q8TCX5 695 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 DBNDD2Q9BQY9 259 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
CHD3-215ENST00000572750 ASTN2O75129 1339 aaPredicted RBP19.45■□□□□ 0.7
CHD3-215ENST00000572750 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms