RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 TRPM7Q96QT4 1865 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 EPHX2P34913 555 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 SCNN1AP37088 669 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
PRPF8-204ENST00000572445 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRPF8-204ENST00000572445 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 CCDC146Q8IYE0 955 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 SYNE4Q8N205 404 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 DEPDC4Q8N2C3 294 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 TAF1DQ9H5J8 278 aaPredicted RBP8.24□□□□□ -1.09
PRPF8-204ENST00000572445 HACL1Q9UJ83 578 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 LAS1LQ9Y4W2 734 aaKnown RBP8.24□□□□□ -1.09
PRPF8-204ENST00000572445 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 LTBP3Q9NS15 1303 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
PRPF8-204ENST00000572445 ADAMTSL1Q8N6G6 1762 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 IQCA1LA6NCM1 817 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L10C9JJH3 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L21D6R901 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 FOXN1O15353 648 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 SERPINB4P48594 390 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
PRPF8-204ENST00000572445 TAF7Q15545 349 aaPredicted RBP8.23□□□□□ -1.09
PRPF8-204ENST00000572445 PROSER3Q2NL68 480 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 LARGE2Q8N3Y3 721 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
PRPF8-204ENST00000572445 KCNK17Q96T54 332 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 ZSWIM6Q9HCJ5 1215 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 TSPYL4Q9UJ04 414 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 MAP3K15Q6ZN16 1313 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 PCNTO95613 3336 aa8.23□□□□□ -1.09
PRPF8-204ENST00000572445 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 PPEF1O14829 653 aaPredicted RBP8.22□□□□□ -1.09
PRPF8-204ENST00000572445 SKIP12755 728 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 NFE2L2Q16236 605 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 AOC3Q16853 763 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 KRT24Q2M2I5 525 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 LDHDQ86WU2 507 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 JDP2Q8WYK2 163 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 ZNF408Q9H9D4 720 aa8.22□□□□□ -1.09
PRPF8-204ENST00000572445 SEPT9Q9UHD8 586 aaPredicted RBP8.22□□□□□ -1.09
PRPF8-204ENST00000572445 SOWAHDA6NJG2 315 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 TRAF5O00463 557 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 PPIP5K2O43314 1243 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 CFHP08603 1231 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 ZNF16P17020 682 aaPredicted RBP8.21□□□□□ -1.1
PRPF8-204ENST00000572445 VEGFBP49765 207 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
PRPF8-204ENST00000572445 SUSD4Q5VX71 490 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 PLEKHM2Q8IWE5 1019 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 NIM1KQ8IY84 436 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 C7orf43Q8WVR3 580 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 CASP8AP2Q9UKL3 1982 aa8.21□□□□□ -1.1
PRPF8-204ENST00000572445 DDX60Q8IY21 1712 aaKnown RBP8.2□□□□□ -1.1
PRPF8-204ENST00000572445 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
PRPF8-204ENST00000572445 EPS15P42566 896 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 LBX1P52954 281 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 EIF4A1P60842 406 aaKnown RBP8.2□□□□□ -1.1
PRPF8-204ENST00000572445 CLEC4GQ6UXB4 293 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 NYXQ9GZU5 481 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 COL4A1P02462 1669 aa8.2□□□□□ -1.1
PRPF8-204ENST00000572445 POLR2AP24928 1970 aaKnown RBP8.19□□□□□ -1.1
PRPF8-204ENST00000572445 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 RIMBP2O15034 1052 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 NTSR2O95665 410 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
PRPF8-204ENST00000572445 PTK7Q13308 1070 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 CNTROBQ8N137 903 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
PRPF8-204ENST00000572445 GPR101Q96P66 508 aaPredicted RBP8.19□□□□□ -1.1
PRPF8-204ENST00000572445 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 ABCC4O15439 1325 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 PASKQ96RG2 1323 aa8.19□□□□□ -1.1
PRPF8-204ENST00000572445 RAD17O75943 681 aa8.18□□□□□ -1.1
PRPF8-204ENST00000572445 ALDH1B1P30837 517 aa8.18□□□□□ -1.1
PRPF8-204ENST00000572445 RIPK4P57078 832 aa8.18□□□□□ -1.1
PRPF8-204ENST00000572445 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
PRPF8-204ENST00000572445 PNISRQ8TF01 805 aaKnown RBP8.18□□□□□ -1.1
PRPF8-204ENST00000572445 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
PRPF8-204ENST00000572445 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
PRPF8-204ENST00000572445 RIC1Q4ADV7 1423 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms