RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
NUP88-202ENST00000570937 ASAP3Q8TDY4 903 aa7.31□□□□□ -1.24
NUP88-202ENST00000570937 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
NUP88-202ENST00000570937 SSBP4Q9BWG4 385 aaPredicted RBP7.31□□□□□ -1.24
NUP88-202ENST00000570937 SOX17Q9H6I2 414 aaPredicted RBP7.31□□□□□ -1.24
NUP88-202ENST00000570937 A0A096LPE4 126 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 A0A1W2PPZ6 126 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 METTL12A8MUP2 240 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
NUP88-202ENST00000570937 SOX1O00570 391 aaPredicted RBP7.3□□□□□ -1.24
NUP88-202ENST00000570937 NOS3P29474 1203 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 CDC25BP30305 580 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 IKBKEQ14164 716 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 KLHDC7BQ96G42 594 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 EHD4Q9H223 541 aa7.3□□□□□ -1.24
NUP88-202ENST00000570937 PNMA6FA0A0J9YX94 578 aa7.29□□□□□ -1.24
NUP88-202ENST00000570937 ESRRAP11474 423 aaPredicted RBP7.29□□□□□ -1.24
NUP88-202ENST00000570937 ITPKAP23677 461 aa7.29□□□□□ -1.24
NUP88-202ENST00000570937 PTPN12Q05209 780 aaKnown RBP7.29□□□□□ -1.24
NUP88-202ENST00000570937 Q6ZS46 218 aa7.29□□□□□ -1.24
NUP88-202ENST00000570937 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.29□□□□□ -1.24
NUP88-202ENST00000570937 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
NUP88-202ENST00000570937 AKTIPQ9H8T0 292 aa7.29□□□□□ -1.24
NUP88-202ENST00000570937 KCNK4Q9NYG8 393 aa7.29□□□□□ -1.24
NUP88-202ENST00000570937 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
NUP88-202ENST00000570937 ADAM23O75077 832 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 ADAM11O75078 769 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 ARL4DP49703 201 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 C19orf57Q0VDD7 668 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 DOC2BQ14184 412 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 GRM2Q14416 872 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 SPRED3Q2MJR0 410 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 GLIS3Q8NEA6 775 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 FOXD4L4Q8WXT5 416 aaPredicted RBP7.28□□□□□ -1.24
NUP88-202ENST00000570937 CLEC4MQ9H2X3 399 aaPredicted RBP7.28□□□□□ -1.24
NUP88-202ENST00000570937 ABCB6Q9NP58 842 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 TRAK1Q9UPV9 953 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 RB1CC1Q8TDY2 1594 aa7.28□□□□□ -1.24
NUP88-202ENST00000570937 GADD45BO75293 160 aaPredicted RBP7.27□□□□□ -1.25
NUP88-202ENST00000570937 WISP1O95388 367 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 FURINP09958 794 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 IREB2P48200 963 aaKnown RBP7.27□□□□□ -1.25
NUP88-202ENST00000570937 HGSNATQ68CP4 663 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 DZIP1LQ8IYY4 767 aaKnown RBP7.27□□□□□ -1.25
NUP88-202ENST00000570937 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 NLRP2Q9NX02 1062 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 NACADO15069 1562 aa7.27□□□□□ -1.25
NUP88-202ENST00000570937 TMEM238LA0A1B0GVL6 79 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 K7ELQ4 463 aaPredicted RBP7.26□□□□□ -1.25
NUP88-202ENST00000570937 MAPK8P45983 427 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 PCDH1Q08174 1060 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 COL19A1Q14993 1142 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
NUP88-202ENST00000570937 NKAPLQ5M9Q1 402 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 ZNF576Q9H609 170 aa7.26□□□□□ -1.25
NUP88-202ENST00000570937 DDX3YO15523 660 aaKnown RBP7.25□□□□□ -1.25
NUP88-202ENST00000570937 ALX3O95076 343 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 B3GALT4O96024 378 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 H2AFB1P0C5Y9 115 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 H2AFB2P0C5Z0 115 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 RPS26P11Q5JNZ5 115 aaPredicted RBP7.25□□□□□ -1.25
NUP88-202ENST00000570937 ALG1LQ6GMV1 187 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 PI16Q6UXB8 463 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 KIAA1211Q6ZU35 1233 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 ACAD11Q709F0 780 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 MEGF10Q96KG7 1140 aa7.25□□□□□ -1.25
NUP88-202ENST00000570937 P4HBP07237 508 aaKnown RBP7.24□□□□□ -1.25
NUP88-202ENST00000570937 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.24□□□□□ -1.25
NUP88-202ENST00000570937 DNAJC14Q6Y2X3 702 aaPredicted RBP7.24□□□□□ -1.25
NUP88-202ENST00000570937 AGGF1Q8N302 714 aaeCLIP7.24□□□□□ -1.25
NUP88-202ENST00000570937 UBASH3BQ8TF42 649 aa7.24□□□□□ -1.25
NUP88-202ENST00000570937 BCO2Q9BYV7 579 aa7.24□□□□□ -1.25
NUP88-202ENST00000570937 NRSN2Q9GZP1 204 aa7.24□□□□□ -1.25
NUP88-202ENST00000570937 ZFYVE1Q9HBF4 777 aa7.24□□□□□ -1.25
NUP88-202ENST00000570937 MEGF11A6BM72 1044 aa7.23□□□□□ -1.25
NUP88-202ENST00000570937 XRCC5P13010 732 aaKnown RBP7.23□□□□□ -1.25
NUP88-202ENST00000570937 NLRP12P59046 1061 aa7.23□□□□□ -1.25
NUP88-202ENST00000570937 TP53INP1Q96A56 240 aa7.23□□□□□ -1.25
NUP88-202ENST00000570937 PPP4R2Q9NY27 417 aa7.23□□□□□ -1.25
NUP88-202ENST00000570937 MYO15BQ96JP2 1530 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 ANKRD33BA6NCL7 494 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 GIPC1O14908 333 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 GSTM4Q03013 218 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 HOMEZQ8IX15 550 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 SETDB2Q96T68 719 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 CEP41Q9BYV8 373 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 SRCIN1Q9C0H9 1055 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 RNF208Q9H0X6 261 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
NUP88-202ENST00000570937 WWC3Q9ULE0 1092 aa7.22□□□□□ -1.25
NUP88-202ENST00000570937 LOC100289279A0A1B0GTE1 492 aa7.21□□□□□ -1.26
NUP88-202ENST00000570937 DYRK3O43781 588 aa7.21□□□□□ -1.26
NUP88-202ENST00000570937 GLB1P16278 677 aa7.21□□□□□ -1.26
NUP88-202ENST00000570937 NXPE4Q6UWF7 544 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms