RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 BCAMP50895 628 aa16.68■□□□□ 0.26
RPAIN-207ENST00000570883 POLA2Q14181 598 aa16.68■□□□□ 0.26
RPAIN-207ENST00000570883 LPIN2Q92539 896 aa16.68■□□□□ 0.26
RPAIN-207ENST00000570883 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
RPAIN-207ENST00000570883 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
RPAIN-207ENST00000570883 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
RPAIN-207ENST00000570883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-207ENST00000570883 ADM5C9JUS6 153 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
RPAIN-207ENST00000570883 SLC5A1P13866 664 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 FKBP1AP62942 108 aaKnown RBP16.67■□□□□ 0.26
RPAIN-207ENST00000570883 SCARF1Q14162 830 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 CST9Q5W186 159 aa16.67■□□□□ 0.26
RPAIN-207ENST00000570883 MVPQ14764 893 aaKnown RBP16.66■□□□□ 0.26
RPAIN-207ENST00000570883 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 ANGEL2Q5VTE6 544 aaKnown RBP16.66■□□□□ 0.26
RPAIN-207ENST00000570883 CDC37L1Q7L3B6 337 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 ZBED3Q96IU2 234 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-207ENST00000570883 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
RPAIN-207ENST00000570883 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 F8W031 263 aaPredicted RBP16.65■□□□□ 0.26
RPAIN-207ENST00000570883 WNT10BO00744 389 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 MS4A1P11836 297 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 ADORA1P30542 326 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 ATP8B2P98198 1209 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 TFCP2Q12800 502 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 GRIK5Q16478 980 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 DCPSQ96C86 337 aaKnown RBP16.65■□□□□ 0.26
RPAIN-207ENST00000570883 PCDHAC2Q9Y5I4 1007 aa16.65■□□□□ 0.26
RPAIN-207ENST00000570883 THSD7BQ9C0I4 1608 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.25
RPAIN-207ENST00000570883 MMP14P50281 582 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-207ENST00000570883 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.25
RPAIN-207ENST00000570883 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
RPAIN-207ENST00000570883 AOX1Q06278 1338 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 PITPNM2Q9BZ72 1349 aa16.64■□□□□ 0.25
RPAIN-207ENST00000570883 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
RPAIN-207ENST00000570883 PHKA1P46020 1223 aa16.63■□□□□ 0.25
RPAIN-207ENST00000570883 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
RPAIN-207ENST00000570883 MYH2Q9UKX2 1941 aa16.62■□□□□ 0.25
RPAIN-207ENST00000570883 SULF1Q8IWU6 871 aa16.62■□□□□ 0.25
RPAIN-207ENST00000570883 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
RPAIN-207ENST00000570883 ZNF408Q9H9D4 720 aa16.62■□□□□ 0.25
RPAIN-207ENST00000570883 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
RPAIN-207ENST00000570883 A0A1B0GUL7 405 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 FRAT2O75474 233 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-207ENST00000570883 TIMM10P62072 90 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
RPAIN-207ENST00000570883 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 TTF2Q9UNY4 1162 aaKnown RBP16.61■□□□□ 0.25
RPAIN-207ENST00000570883 PAPPA2Q9BXP8 1791 aa16.61■□□□□ 0.25
RPAIN-207ENST00000570883 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPAIN-207ENST00000570883 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 TBC1D22AQ8WUA7 517 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 TLL2Q9Y6L7 1015 aa16.6■□□□□ 0.25
RPAIN-207ENST00000570883 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
RPAIN-207ENST00000570883 VEGFBP49765 207 aa16.59■□□□□ 0.25
RPAIN-207ENST00000570883 SAPCD2Q86UD0 394 aa16.59■□□□□ 0.25
RPAIN-207ENST00000570883 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
RPAIN-207ENST00000570883 PRMT6Q96LA8 375 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-207ENST00000570883 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
RPAIN-207ENST00000570883 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
RPAIN-207ENST00000570883 ZBTB22O15209 634 aa16.58■□□□□ 0.24
RPAIN-207ENST00000570883 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
RPAIN-207ENST00000570883 PRAMEF18Q5VWM3 479 aa16.58■□□□□ 0.24
RPAIN-207ENST00000570883 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-207ENST00000570883 SERPINA10Q9UK55 444 aa16.58■□□□□ 0.24
RPAIN-207ENST00000570883 SEMA3EO15041 775 aa16.57■□□□□ 0.24
RPAIN-207ENST00000570883 CRKP46108 304 aa16.57■□□□□ 0.24
RPAIN-207ENST00000570883 DEFB115Q30KQ5 88 aa16.57■□□□□ 0.24
RPAIN-207ENST00000570883 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
RPAIN-207ENST00000570883 SIRT2Q8IXJ6 389 aa16.57■□□□□ 0.24
RPAIN-207ENST00000570883 GNL3LQ9NVN8 582 aaKnown RBP16.57■□□□□ 0.24
RPAIN-207ENST00000570883 CLRN2A0PK11 232 aa16.56■□□□□ 0.24
RPAIN-207ENST00000570883 RBM5P52756 815 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPAIN-207ENST00000570883 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-207ENST00000570883 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
RPAIN-207ENST00000570883 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
RPAIN-207ENST00000570883 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
RPAIN-207ENST00000570883 GBA2Q9HCG7 927 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms