RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TTLL11Q8NHH1 800 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 TMEM106CQ9BVX2 250 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 ARAP2Q8WZ64 1704 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 ZNF804BA4D1E1 1349 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 ZBTB7BO15156 539 aaPredicted RBP9.43□□□□□ -0.9
SMG6-205ENST00000570659 PDE8AO60658 829 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
SMG6-205ENST00000570659 NF2P35240 595 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 ANKRD18AQ8IVF6 992 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 DPF3Q92784 378 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 STAP2Q9UGK3 403 aa9.43□□□□□ -0.9
SMG6-205ENST00000570659 LAS1LQ9Y4W2 734 aaKnown RBP9.43□□□□□ -0.9
SMG6-205ENST00000570659 COL1A1P02452 1464 aaPredicted RBP9.42□□□□□ -0.9
SMG6-205ENST00000570659 CCL15-CCL14A0A0B4J2E2 113 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 CTSWP56202 376 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 INHBEP58166 350 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 VGLL4Q14135 290 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 RASA3Q14644 834 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 TAF1CQ15572 869 aaPredicted RBP9.42□□□□□ -0.9
SMG6-205ENST00000570659 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 CCL15Q16663 113 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 CFAP100Q494V2 611 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 CCDC152Q4G0S7 254 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 HELBQ8NG08 1087 aaPredicted RBP9.42□□□□□ -0.9
SMG6-205ENST00000570659 TRIM47Q96LD4 638 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 VEZTQ9HBM0 779 aa9.42□□□□□ -0.9
SMG6-205ENST00000570659 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 BTBD19C9JJ37 291 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
SMG6-205ENST00000570659 TAF5LO75529 589 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
SMG6-205ENST00000570659 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
SMG6-205ENST00000570659 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 TMEM39BQ9GZU3 492 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 COA1Q9GZY4 146 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 CD209Q9NNX6 404 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
SMG6-205ENST00000570659 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
SMG6-205ENST00000570659 CCL5P13501 91 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 CACNB3P54284 484 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 MOGSQ13724 837 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 DLGAP5Q15398 846 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 DIS3LQ8TF46 1054 aaKnown RBP9.4□□□□□ -0.9
SMG6-205ENST00000570659 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
SMG6-205ENST00000570659 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
SMG6-205ENST00000570659 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 MGAMO43451 1857 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 OSBPP22059 807 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 MNX1P50219 401 aaPredicted RBP9.39□□□□□ -0.91
SMG6-205ENST00000570659 CASP7P55210 303 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG6-205ENST00000570659 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
SMG6-205ENST00000570659 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
SMG6-205ENST00000570659 BABAM1Q9NWV8 329 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 CWC25Q9NXE8 425 aaPredicted RBP9.39□□□□□ -0.91
SMG6-205ENST00000570659 RAPGEFL1Q9UHV5 662 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 GABRQQ9UN88 632 aa9.39□□□□□ -0.91
SMG6-205ENST00000570659 LAMA2P24043 3122 aaKnown RBP9.38□□□□□ -0.91
SMG6-205ENST00000570659 PRUNE2Q8WUY3 3088 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
SMG6-205ENST00000570659 TLR2O60603 784 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 GJA8P48165 433 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 CHRNDQ07001 517 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 G2E3Q7L622 706 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 CCDC191Q8NCU4 936 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 ZKSCAN4Q969J2 545 aaPredicted RBP9.38□□□□□ -0.91
SMG6-205ENST00000570659 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
SMG6-205ENST00000570659 MAP3K2Q9Y2U5 619 aa9.38□□□□□ -0.91
SMG6-205ENST00000570659 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 IRF6O14896 467 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
SMG6-205ENST00000570659 PRKCZQ05513 592 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 SPDYE2Q495Y8 402 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 U2AF1L4Q8WU68 220 aaKnown RBP9.37□□□□□ -0.91
SMG6-205ENST00000570659 GDF15Q99988 308 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 ZFYVE28Q9HCC9 887 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 MTMR10Q9NXD2 777 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 SRRDQ9UH36 339 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
SMG6-205ENST00000570659 DOCK3Q8IZD9 2030 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 FARP2O94887 1054 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms