RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 KIAA0825Q8IV33 1275 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 ANKRD13AQ8IZ07 590 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 CCDC85AQ96PX6 553 aaPredicted RBP13.31□□□□□ -0.28
TCF4-244ENST00000570146 HTATIP2Q9BUP3 242 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 MXD3Q9BW11 206 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
TCF4-244ENST00000570146 PTCH2Q9Y6C5 1203 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 TAF1P21675 1872 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
TCF4-244ENST00000570146 MYCP01106 439 aaPredicted RBP13.3□□□□□ -0.28
TCF4-244ENST00000570146 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
TCF4-244ENST00000570146 NKX2-3Q8TAU0 364 aa13.3□□□□□ -0.28
TCF4-244ENST00000570146 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
TCF4-244ENST00000570146 NR2E3Q9Y5X4 410 aa13.3□□□□□ -0.28
TCF4-244ENST00000570146 COL6A3P12111 3177 aa13.3□□□□□ -0.28
TCF4-244ENST00000570146 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
TCF4-244ENST00000570146 KIAA0100Q14667 2235 aaKnown RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 GNRH1P01148 92 aa13.29□□□□□ -0.28
TCF4-244ENST00000570146 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 BSDC1Q9NW68 430 aaPredicted RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 FZD1Q9UP38 647 aa13.29□□□□□ -0.28
TCF4-244ENST00000570146 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
TCF4-244ENST00000570146 LAS1LQ9Y4W2 734 aaKnown RBP13.29□□□□□ -0.28
TCF4-244ENST00000570146 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
TCF4-244ENST00000570146 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
TCF4-244ENST00000570146 PRMT2P55345 433 aa13.28□□□□□ -0.28
TCF4-244ENST00000570146 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
TCF4-244ENST00000570146 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
TCF4-244ENST00000570146 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 CHL1O00533 1208 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 KCNJ4P48050 445 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 GTF2A2P52657 109 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 GTF2IP78347 998 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 ZBED3Q96IU2 234 aaPredicted RBP13.27□□□□□ -0.29
TCF4-244ENST00000570146 MYD88Q99836 296 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 PTPN18Q99952 460 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 VEZTQ9HBM0 779 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
TCF4-244ENST00000570146 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
TCF4-244ENST00000570146 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
TCF4-244ENST00000570146 CTSWP56202 376 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 TNFAIP1Q13829 316 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 SH3TC2Q8TF17 1288 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
TCF4-244ENST00000570146 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 GJA5P36382 358 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
TCF4-244ENST00000570146 CCL15Q16663 113 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 CEP290O15078 2479 aa13.25□□□□□ -0.29
TCF4-244ENST00000570146 COL4A1P02462 1669 aa13.24□□□□□ -0.29
TCF4-244ENST00000570146 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
TCF4-244ENST00000570146 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
TCF4-244ENST00000570146 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
TCF4-244ENST00000570146 USP2O75604 605 aaPredicted RBP13.24□□□□□ -0.29
TCF4-244ENST00000570146 HOXD10P28358 340 aa13.24□□□□□ -0.29
TCF4-244ENST00000570146 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
TCF4-244ENST00000570146 CSADQ9Y600 493 aa13.24□□□□□ -0.29
TCF4-244ENST00000570146 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
TCF4-244ENST00000570146 RASA3Q14644 834 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 NBPF12Q5TAG4 269 aaPredicted RBP13.23□□□□□ -0.29
TCF4-244ENST00000570146 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
TCF4-244ENST00000570146 MS4A4AQ96JQ5 239 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 ZCCHC17Q9NP64 241 aaKnown RBP13.23□□□□□ -0.29
TCF4-244ENST00000570146 PSME4Q14997 1843 aa13.23□□□□□ -0.29
TCF4-244ENST00000570146 TLR2O60603 784 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 CAP1Q01518 475 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 TTLL11Q8NHH1 800 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 RAET1EQ8TD07 263 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 BRI3BPQ8WY22 251 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
TCF4-244ENST00000570146 GREM2Q9H772 168 aa13.22□□□□□ -0.29
TCF4-244ENST00000570146 SSC5DA1L4H1 1573 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 F8W031 263 aaPredicted RBP13.21□□□□□ -0.29
TCF4-244ENST00000570146 CETPP11597 493 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 GJA8P48165 433 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 UBXN2AP68543 259 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
TCF4-244ENST00000570146 CD209Q9NNX6 404 aa13.21□□□□□ -0.29
TCF4-244ENST00000570146 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.29
TCF4-244ENST00000570146 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
TCF4-244ENST00000570146 EVI5O60447 810 aa13.2□□□□□ -0.3
TCF4-244ENST00000570146 GJB1P08034 283 aa13.2□□□□□ -0.3
TCF4-244ENST00000570146 CAPN2P17655 700 aa13.2□□□□□ -0.3
TCF4-244ENST00000570146 TNNI2P48788 182 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms