RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 BIN2Q9UBW5 565 aaPredicted RBP8.23□□□□□ -1.09
GDE1-204ENST00000569773 PLCH1Q4KWH8 1693 aa8.23□□□□□ -1.09
GDE1-204ENST00000569773 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
GDE1-204ENST00000569773 NWD2Q9ULI1 1742 aa8.23□□□□□ -1.09
GDE1-204ENST00000569773 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
GDE1-204ENST00000569773 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 TGFBR3LH3BV60 316 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 ZBTB39O15060 712 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 NFX1Q12986 1120 aaKnown RBP8.22□□□□□ -1.09
GDE1-204ENST00000569773 DBN1Q16643 649 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 SND1Q7KZF4 910 aaKnown RBP eCLIP8.22□□□□□ -1.09
GDE1-204ENST00000569773 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
GDE1-204ENST00000569773 C14orf93Q9H972 538 aaKnown RBP8.22□□□□□ -1.09
GDE1-204ENST00000569773 ANKIB1Q9P2G1 1089 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 GLI3P10071 1580 aa8.22□□□□□ -1.09
GDE1-204ENST00000569773 ARHGEF28Q8N1W1 1705 aaKnown RBP8.21□□□□□ -1.09
GDE1-204ENST00000569773 SLIT2O94813 1529 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 H7C1W4 665 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 FAM13AO94988 1023 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 ADAMTS2O95450 1211 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 NPR3P17342 541 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 ECM1Q16610 540 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 NLRP8Q86W28 1048 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 ABTB2Q8N961 1025 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 ZNF837Q96EG3 531 aaPredicted RBP8.21□□□□□ -1.1
GDE1-204ENST00000569773 STK26Q9P289 416 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.1
GDE1-204ENST00000569773 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 FAM181BA6NEQ2 426 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 EIF1AXP47813 144 aaKnown RBP8.2□□□□□ -1.1
GDE1-204ENST00000569773 VEGFBP49765 207 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 LBRQ14739 615 aaKnown RBP8.2□□□□□ -1.1
GDE1-204ENST00000569773 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
GDE1-204ENST00000569773 IER5Q5VY09 327 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 BTLAQ7Z6A9 289 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 ZCCHC2Q9C0B9 1178 aaKnown RBP8.2□□□□□ -1.1
GDE1-204ENST00000569773 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
GDE1-204ENST00000569773 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
GDE1-204ENST00000569773 CDC14CA4D256 554 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 TERTO14746 1132 aaKnown RBP8.19□□□□□ -1.1
GDE1-204ENST00000569773 MICAL2O94851 1124 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 YY1P25490 414 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 IDH3AP50213 366 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 ARHGAP4P98171 946 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 XPCQ01831 940 aaPredicted RBP8.19□□□□□ -1.1
GDE1-204ENST00000569773 UBAP2LQ14157 1087 aaKnown RBP8.19□□□□□ -1.1
GDE1-204ENST00000569773 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 CEP63Q96MT8 703 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
GDE1-204ENST00000569773 USP21Q9UK80 565 aa8.19□□□□□ -1.1
GDE1-204ENST00000569773 ZAP70P43403 619 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 TYRO3Q06418 890 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 AAMPQ13685 434 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 FIGNL1Q6PIW4 674 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 VWA5B2Q8N398 1253 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 GTPBP3Q969Y2 492 aaKnown RBP8.18□□□□□ -1.1
GDE1-204ENST00000569773 TRPC5Q9UL62 973 aaPredicted RBP8.18□□□□□ -1.1
GDE1-204ENST00000569773 TNS3Q68CZ2 1445 aa8.18□□□□□ -1.1
GDE1-204ENST00000569773 ITSN1Q15811 1721 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 DCDC2BA2VCK2 349 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 ATXN7O15265 892 aaPredicted RBP8.17□□□□□ -1.1
GDE1-204ENST00000569773 SAMD5Q5TGI4 173 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 ALKBH2Q6NS38 261 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 NPAS3Q8IXF0 933 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 GMCL1Q96IK5 515 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 PCDHGC4Q9Y5F7 938 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 DHX57Q6P158 1386 aaKnown RBP8.17□□□□□ -1.1
GDE1-204ENST00000569773 ANKARQ7Z5J8 1434 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 RALGAPBQ86X10 1494 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 TOPAZ1Q8N9V7 1692 aa8.17□□□□□ -1.1
GDE1-204ENST00000569773 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 GPR25O00155 361 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 OPLAHO14841 1288 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 INPP5BP32019 993 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 BRD7Q9NPI1 651 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 USP20Q9Y2K6 914 aa8.16□□□□□ -1.1
GDE1-204ENST00000569773 TULP4Q9NRJ4 1543 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 KHNYNO15037 678 aaKnown RBP8.15□□□□□ -1.1
GDE1-204ENST00000569773 BNIP3LO60238 219 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 FZD6O60353 706 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 FAM157BP0CG42 384 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 ARSDP51689 593 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 SV2AQ7L0J3 742 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 KRT28Q7Z3Y7 464 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 RGL4Q8IZJ4 473 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 ABHD17AQ96GS6 310 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 PRAM1Q96QH2 718 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
GDE1-204ENST00000569773 COL14A1Q05707 1796 aaKnown RBP8.15□□□□□ -1.11
GDE1-204ENST00000569773 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
GDE1-204ENST00000569773 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
GDE1-204ENST00000569773 DNM1Q05193 864 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms