RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 CDC5LQ99459 802 aaKnown RBP14.34□□□□□ -0.11
CHRFAM7A-206ENST00000569278 FZD1Q9UP38 647 aa14.34□□□□□ -0.11
CHRFAM7A-206ENST00000569278 HPS5Q9UPZ3 1129 aa14.34□□□□□ -0.11
CHRFAM7A-206ENST00000569278 SNAP23O00161 211 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 PYGBP11216 843 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 UBE3BQ7Z3V4 1068 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CERS5Q8N5B7 392 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.12
CHRFAM7A-206ENST00000569278 G3V3G9 751 aa14.32□□□□□ -0.12
CHRFAM7A-206ENST00000569278 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
CHRFAM7A-206ENST00000569278 ARAP2Q8WZ64 1704 aa14.32□□□□□ -0.12
CHRFAM7A-206ENST00000569278 TM4SF4P48230 202 aa14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 PTPN12Q05209 780 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 MKRN3Q13064 507 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 GCKRQ14397 625 aa14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 COA1Q9GZY4 146 aa14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 COL1A1P02452 1464 aaPredicted RBP14.31□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CSF1RP07333 972 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 ITGA6P23229 1130 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 LDLRAD1Q5T700 205 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 KIAA0825Q8IV33 1275 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CFHR5Q9BXR6 569 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 MRS2Q9HD23 443 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 ZNF804BA4D1E1 1349 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 MYO3BQ8WXR4 1341 aa14.3□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CHRNDQ07001 517 aa14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 LEMD3Q9Y2U8 911 aa14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 RBBP6Q7Z6E9 1792 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-206ENST00000569278 GPR25O00155 361 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 GTF2IP78347 998 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CAP1Q01518 475 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 FLIIQ13045 1269 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CCDC27Q2M243 656 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 FANCIQ9NVI1 1328 aa14.28□□□□□ -0.12
CHRFAM7A-206ENST00000569278 CHRM1P11229 460 aaPredicted RBP14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 FOXO4P98177 505 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 PRKG1Q13976 671 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 SPRYD7Q5W111 196 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 TTLL5Q6EMB2 1281 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 CLMNQ96JQ2 1002 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 CD209Q9NNX6 404 aa14.27□□□□□ -0.13
CHRFAM7A-206ENST00000569278 MAP3K13O43283 966 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 GJA5P36382 358 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 TTLL12Q14166 644 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 EPHA10Q5JZY3 1008 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 PRPF38BQ5VTL8 546 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 APOBEC3FQ8IUX4 373 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
CHRFAM7A-206ENST00000569278 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 TAF5LO75529 589 aa14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 MTMR14Q8NCE2 650 aa14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 HELBQ8NG08 1087 aaPredicted RBP14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 DEFB129Q9H1M3 183 aa14.25□□□□□ -0.13
CHRFAM7A-206ENST00000569278 IL16Q14005 1332 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 IL1R1P14778 569 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 FBXO46Q6PJ61 603 aaPredicted RBP14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 CDAN1Q8IWY9 1227 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 LINS1Q8NG48 757 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ANKRD2Q9GZV1 360 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ANGEL1Q9UNK9 670 aaKnown RBP14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 JAG2Q9Y219 1238 aa14.24□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ZSWIM8A7E2V4 1837 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 F6X3S4 739 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 VAMP4O75379 141 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 MMP14P50281 582 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 BEND3Q5T5X7 828 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 WNK4Q96J92 1243 aa14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 PRMT6Q96LA8 375 aaPredicted RBP14.23□□□□□ -0.13
CHRFAM7A-206ENST00000569278 SZT2Q5T011 3432 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 CLRN2A0PK11 232 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 FKTNO75072 461 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 NF2P35240 595 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 FKBP5Q13451 457 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 ARMC9Q7Z3E5 817 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
CHRFAM7A-206ENST00000569278 HDAC9Q9UKV0 1011 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms