RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
CNOT1-214ENST00000568917 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
CNOT1-214ENST00000568917 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
CNOT1-214ENST00000568917 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-214ENST00000568917 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
CNOT1-214ENST00000568917 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
CNOT1-214ENST00000568917 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-214ENST00000568917 FGFR2P21802 821 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-214ENST00000568917 HSPA4P34932 840 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 E2F4Q16254 413 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 BSDC1Q9NW68 430 aaPredicted RBP11.31□□□□□ -0.6
CNOT1-214ENST00000568917 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
CNOT1-214ENST00000568917 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
CNOT1-214ENST00000568917 EVI5O60447 810 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 ZFYP08048 801 aaPredicted RBP11.3□□□□□ -0.6
CNOT1-214ENST00000568917 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
CNOT1-214ENST00000568917 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 SLC5A1P13866 664 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 MCM2P49736 904 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
CNOT1-214ENST00000568917 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
CNOT1-214ENST00000568917 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
CNOT1-214ENST00000568917 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 DPYSL4O14531 572 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 MYH7P12883 1935 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 ARID4AP29374 1257 aaPredicted RBP11.29□□□□□ -0.6
CNOT1-214ENST00000568917 TTF1Q15361 905 aaPredicted RBP11.29□□□□□ -0.6
CNOT1-214ENST00000568917 AMIGO3Q86WK7 504 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 KCNB2Q92953 911 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
CNOT1-214ENST00000568917 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 AKAP11Q9UKA4 1901 aa11.29□□□□□ -0.6
CNOT1-214ENST00000568917 QSER1Q2KHR3 1735 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 CCDC171Q6TFL3 1326 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
CNOT1-214ENST00000568917 APBA3O96018 575 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 GYS1P13807 737 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 TM4SF1P30408 202 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 UBE4AQ14139 1066 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 NFIXQ14938 502 aa11.28□□□□□ -0.6
CNOT1-214ENST00000568917 RGS17Q9UGC6 210 aaPredicted RBP11.28□□□□□ -0.6
CNOT1-214ENST00000568917 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.6
CNOT1-214ENST00000568917 IGSF3O75054 1194 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 PHF14O94880 888 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 NMIQ13287 307 aaPredicted RBP11.27□□□□□ -0.61
CNOT1-214ENST00000568917 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 RNF20Q5VTR2 975 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 BICDL1Q6ZP65 573 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 CNBD1Q8NA66 436 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 MAP4K1Q92918 833 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
CNOT1-214ENST00000568917 IL25Q9H293 177 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 SEC31BQ9NQW1 1179 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
CNOT1-214ENST00000568917 ADORA1P30542 326 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
CNOT1-214ENST00000568917 ST5P78524 1137 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 CHRNDQ07001 517 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 TM6SF1Q9BZW5 370 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■□ 19.3
CNOT1-214ENST00000568917 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
CNOT1-214ENST00000568917 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-214ENST00000568917 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
CNOT1-214ENST00000568917 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 GOLIM4O00461 696 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 NPHP1O15259 732 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
CNOT1-214ENST00000568917 ZKSCAN1P17029 563 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-214ENST00000568917 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 ZMYM1Q5SVZ6 1142 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 TMED8Q6PL24 325 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-214ENST00000568917 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
CNOT1-214ENST00000568917 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
CNOT1-214ENST00000568917 ZNF804BA4D1E1 1349 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
CNOT1-214ENST00000568917 KLRG2A4D1S0 409 aaPredicted RBP11.24□□□□□ -0.61
CNOT1-214ENST00000568917 SEMA3EO15041 775 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 TAF5LO75529 589 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 MCAMP43121 646 aa11.24□□□□□ -0.61
CNOT1-214ENST00000568917 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms