RNA–Protein interactions for RNA: ENST00000568859.5

SNAP23-221, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-221ENST00000568859 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
SNAP23-221ENST00000568859 GNRH1P01148 92 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 GTF2A2P52657 109 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 NBPF12Q5TAG4 269 aaPredicted RBP20.26■□□□□ 0.83
SNAP23-221ENST00000568859 TXNRD3Q86VQ6 643 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 TTLL11Q8NHH1 800 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 NKX2-3Q8TAU0 364 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 HTATIP2Q9BUP3 242 aa20.26■□□□□ 0.83
SNAP23-221ENST00000568859 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
SNAP23-221ENST00000568859 PRMT2P55345 433 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 CAP1Q01518 475 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 TNFAIP1Q13829 316 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 METTL22Q9BUU2 404 aaPredicted RBP20.25■□□□□ 0.83
SNAP23-221ENST00000568859 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 GREM2Q9H772 168 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 PHAXQ9H814 394 aaKnown RBP20.25■□□□□ 0.83
SNAP23-221ENST00000568859 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
SNAP23-221ENST00000568859 CLRN2A0PK11 232 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 CFAP100Q494V2 611 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 SH3TC2Q8TF17 1288 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 MPHOSPH8Q99549 860 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 NR2E3Q9Y5X4 410 aa20.24■□□□□ 0.83
SNAP23-221ENST00000568859 CCL15-CCL14A0A0B4J2E2 113 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 RASA3Q14644 834 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 CCL15Q16663 113 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
SNAP23-221ENST00000568859 RBM5P52756 815 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNAP23-221ENST00000568859 BRI3BPQ8WY22 251 aa20.22■□□□□ 0.83
SNAP23-221ENST00000568859 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
SNAP23-221ENST00000568859 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
SNAP23-221ENST00000568859 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
SNAP23-221ENST00000568859 CSADQ9Y600 493 aa20.21■□□□□ 0.83
SNAP23-221ENST00000568859 A0A1W2PPC1 479 aa20.2■□□□□ 0.82
SNAP23-221ENST00000568859 FKBP1AP62942 108 aaKnown RBP20.2■□□□□ 0.82
SNAP23-221ENST00000568859 LACTBP83111 547 aaPredicted RBP20.2■□□□□ 0.82
SNAP23-221ENST00000568859 PRMT6Q96LA8 375 aaPredicted RBP20.2■□□□□ 0.82
SNAP23-221ENST00000568859 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
SNAP23-221ENST00000568859 TRIM35Q9UPQ4 493 aa20.2■□□□□ 0.82
SNAP23-221ENST00000568859 SPEF2Q9C093 1822 aa20.19■□□□□ 0.82
SNAP23-221ENST00000568859 TLR2O60603 784 aa20.19■□□□□ 0.82
SNAP23-221ENST00000568859 KLRK1P26718 216 aa20.19■□□□□ 0.82
SNAP23-221ENST00000568859 MNX1P50219 401 aaPredicted RBP20.19■□□□□ 0.82
SNAP23-221ENST00000568859 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
SNAP23-221ENST00000568859 MAP3K2Q9Y2U5 619 aa20.19■□□□□ 0.82
SNAP23-221ENST00000568859 MYH3P11055 1940 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 HOXD10P28358 340 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 MAP3K9P80192 1104 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 HELBQ8NG08 1087 aaPredicted RBP20.18■□□□□ 0.82
SNAP23-221ENST00000568859 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 MBIPQ9NS73 344 aa20.18■□□□□ 0.82
SNAP23-221ENST00000568859 CETPP11597 493 aa20.17■□□□□ 0.82
SNAP23-221ENST00000568859 ITGA6P23229 1130 aa20.17■□□□□ 0.82
SNAP23-221ENST00000568859 PCDHAC2Q9Y5I4 1007 aa20.17■□□□□ 0.82
SNAP23-221ENST00000568859 RANBP2P49792 3224 aaKnown RBP20.17■□□□□ 0.82
SNAP23-221ENST00000568859 CHRNDQ07001 517 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 VGLL4Q14135 290 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 CCDC30Q5VVM6 783 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.16■□□□□ 0.82
SNAP23-221ENST00000568859 SHISA4Q96DD7 197 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 ARHGAP39Q9C0H5 1083 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 PRO3102Q9H379 93 aa20.16■□□□□ 0.82
SNAP23-221ENST00000568859 GJA8P48165 433 aa20.15■□□□□ 0.82
SNAP23-221ENST00000568859 TNNI2P48788 182 aa20.15■□□□□ 0.82
SNAP23-221ENST00000568859 KSR2Q6VAB6 950 aa20.15■□□□□ 0.82
SNAP23-221ENST00000568859 RAET1EQ8TD07 263 aa20.15■□□□□ 0.82
SNAP23-221ENST00000568859 ELL2O00472 640 aaPredicted RBP20.14■□□□□ 0.81
SNAP23-221ENST00000568859 GJB1P08034 283 aa20.14■□□□□ 0.81
SNAP23-221ENST00000568859 IL1R1P14778 569 aa20.14■□□□□ 0.81
SNAP23-221ENST00000568859 MTFR1Q15390 333 aa20.14■□□□□ 0.81
SNAP23-221ENST00000568859 SPDYE2Q495Y8 402 aa20.14■□□□□ 0.81
SNAP23-221ENST00000568859 C15orf52Q6ZUT6 534 aaKnown RBP20.14■□□□□ 0.81
SNAP23-221ENST00000568859 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
SNAP23-221ENST00000568859 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
SNAP23-221ENST00000568859 IGKV5-2P06315 115 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 GRK4P32298 578 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 UBXN2AP68543 259 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
SNAP23-221ENST00000568859 SNAPC2Q13487 334 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.13■□□□□ 0.81
SNAP23-221ENST00000568859 TRIM47Q96LD4 638 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
SNAP23-221ENST00000568859 SRRDQ9UH36 339 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 OTOFQ9HC10 1997 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 CUL9Q8IWT3 2517 aa20.13■□□□□ 0.81
SNAP23-221ENST00000568859 PI4KAP2A4QPH2 592 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
SNAP23-221ENST00000568859 GNAI1P63096 354 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
SNAP23-221ENST00000568859 RALBP1Q15311 655 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 PI4KAP1Q8N8J0 262 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 RNF208Q9H0X6 261 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 SERPINA10Q9UK55 444 aa20.12■□□□□ 0.81
SNAP23-221ENST00000568859 A0A0C4DFX4 3053 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms