RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
HERPUD1-216ENST00000568814 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-216ENST00000568814 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
HERPUD1-216ENST00000568814 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-216ENST00000568814 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
HERPUD1-216ENST00000568814 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 RASGRF1Q13972 1273 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 ZGPATQ8N5A5 531 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 SPATA5Q8NB90 893 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 COL4A5P29400 1685 aa12.45□□□□□ -0.42
HERPUD1-216ENST00000568814 PSME4Q14997 1843 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 FAM205AQ6ZU69 1335 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 IGSF3O75054 1194 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 MCAMP43121 646 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 PRELPP51888 382 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 PI4K2BQ8TCG2 481 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 HAUS7Q99871 368 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 HMG20BQ9P0W2 317 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
HERPUD1-216ENST00000568814 MYO3BQ8WXR4 1341 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 SALL1Q9NSC2 1324 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 COL1A1P02452 1464 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 FZD9O00144 591 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 FKBP1AP62942 108 aaKnown RBP12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 TNIP1Q15025 636 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 CIAPIN1Q6FI81 312 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 BOLA2Q9H3K6 86 aa12.43□□□□□ -0.42
HERPUD1-216ENST00000568814 SCN9AQ15858 1988 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 RGS3P49796 1198 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 GTF2IP78347 998 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 SCARF1Q14162 830 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 TTLL5Q6EMB2 1281 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 SUGT1Q9Y2Z0 365 aa12.42□□□□□ -0.42
HERPUD1-216ENST00000568814 ZAP70P43403 619 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 MFSD14BQ5SR56 506 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 PI16Q6UXB8 463 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
HERPUD1-216ENST00000568814 MAST3O60307 1309 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 GOLIM4O00461 696 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 PSMD14O00487 310 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 RAD17O75943 681 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 SLC34A2O95436 690 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 CYP2E1P05181 493 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 VIL1P09327 827 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 MMP14P50281 582 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 CXCL9Q07325 125 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 DACT2Q5SW24 774 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 TNS4Q8IZW8 715 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 GPC2Q8N158 579 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 AGBL3Q8NEM8 1001 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
HERPUD1-216ENST00000568814 WDR90Q96KV7 1748 aa12.4□□□□□ -0.43
HERPUD1-216ENST00000568814 MAST2Q6P0Q8 1798 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 LDHBP07195 334 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
HERPUD1-216ENST00000568814 ZNF541Q9H0D2 1346 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 TRIM6-TRIM34B2RNG4 842 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 ZSCAN25Q6NSZ9 544 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 ERICH6Q7L0X2 663 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 FSD1Q9BTV5 496 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
HERPUD1-216ENST00000568814 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
HERPUD1-216ENST00000568814 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms