RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.8
SMG1-214ENST00000568038 CDC14CA4D256 554 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 SLC35F4A4IF30 521 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 E9PSI1 815 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 CHL1O00533 1208 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 KCNQ3O43525 872 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 TRIM37O94972 964 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 ZNF853P0CG23 659 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
SMG1-214ENST00000568038 MCCD1P59942 119 aaPredicted RBP10.02□□□□□ -0.81
SMG1-214ENST00000568038 SLFN5Q08AF3 891 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 VWA5B2Q8N398 1253 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 TSR2Q969E8 191 aaKnown RBP10.02□□□□□ -0.81
SMG1-214ENST00000568038 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 IFT57Q9NWB7 429 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.81
SMG1-214ENST00000568038 BCL9O00512 1426 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 CC2D2BQ6DHV5 1058 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 LYSMD3Q7Z3D4 306 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 MYH16Q9H6N6 1097 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 ASAP1Q9ULH1 1129 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 MRC1P22897 1456 aa10.01□□□□□ -0.81
SMG1-214ENST00000568038 ITGB4P16144 1822 aa10□□□□□ -0.81
SMG1-214ENST00000568038 SOCS7O14512 581 aa10□□□□□ -0.81
SMG1-214ENST00000568038 RHOQP17081 205 aa10□□□□□ -0.81
SMG1-214ENST00000568038 SCTRP47872 440 aa10□□□□□ -0.81
SMG1-214ENST00000568038 ZNF790Q6PG37 636 aa10□□□□□ -0.81
SMG1-214ENST00000568038 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
SMG1-214ENST00000568038 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
SMG1-214ENST00000568038 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
SMG1-214ENST00000568038 PRM3Q9NNZ6 103 aa10□□□□□ -0.81
SMG1-214ENST00000568038 ATG3Q9NT62 314 aa10□□□□□ -0.81
SMG1-214ENST00000568038 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
SMG1-214ENST00000568038 FANCIQ9NVI1 1328 aa10□□□□□ -0.81
SMG1-214ENST00000568038 A0A1W2PRU2 124 aa9.99□□□□□ -0.81
SMG1-214ENST00000568038 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
SMG1-214ENST00000568038 PTCD1O75127 700 aaKnown RBP9.99□□□□□ -0.81
SMG1-214ENST00000568038 ITGA6P23229 1130 aa9.99□□□□□ -0.81
SMG1-214ENST00000568038 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
SMG1-214ENST00000568038 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
SMG1-214ENST00000568038 TRMT2AQ8IZ69 625 aaKnown RBP9.99□□□□□ -0.81
SMG1-214ENST00000568038 SIPA1L3O60292 1781 aaPredicted RBP9.98□□□□□ -0.81
SMG1-214ENST00000568038 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
SMG1-214ENST00000568038 EIF4A1P60842 406 aaKnown RBP9.98□□□□□ -0.81
SMG1-214ENST00000568038 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
SMG1-214ENST00000568038 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
SMG1-214ENST00000568038 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
SMG1-214ENST00000568038 ZNF496Q96IT1 587 aaPredicted RBP9.98□□□□□ -0.81
SMG1-214ENST00000568038 NHSQ6T4R5 1651 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
SMG1-214ENST00000568038 SV2AQ7L0J3 742 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 TSPYL6Q8N831 410 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 SMARCC1Q92922 1105 aaPredicted RBP9.97□□□□□ -0.81
SMG1-214ENST00000568038 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 COL25A1Q9BXS0 654 aaPredicted RBP9.97□□□□□ -0.81
SMG1-214ENST00000568038 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 PALLDQ8WX93 1383 aa9.97□□□□□ -0.81
SMG1-214ENST00000568038 APBA3O96018 575 aa9.96□□□□□ -0.82
SMG1-214ENST00000568038 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.82
SMG1-214ENST00000568038 CYP2U1Q7Z449 544 aa9.96□□□□□ -0.82
SMG1-214ENST00000568038 KDM3BQ7LBC6 1761 aa9.96□□□□□ -0.82
SMG1-214ENST00000568038 BTAF1O14981 1849 aa9.96□□□□□ -0.82
SMG1-214ENST00000568038 LOC102724428A0A0B4J2F2 783 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 PRAMEF22A3QJZ6 481 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 SNRPA1P09661 255 aaKnown RBP9.95□□□□□ -0.82
SMG1-214ENST00000568038 ABL2P42684 1182 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 KCNQ4P56696 695 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 SIK1P57059 783 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 KRT76Q01546 638 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
SMG1-214ENST00000568038 TWISTNBQ3B726 338 aaPredicted RBP9.95□□□□□ -0.82
SMG1-214ENST00000568038 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
SMG1-214ENST00000568038 GDPD2Q9HCC8 539 aa9.95□□□□□ -0.82
SMG1-214ENST00000568038 HEG1Q9ULI3 1381 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 VAMP4O75379 141 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 EIF2S2P20042 333 aaKnown RBP9.94□□□□□ -0.82
SMG1-214ENST00000568038 DNAJC10Q8IXB1 793 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
SMG1-214ENST00000568038 SLC4A9Q96Q91 983 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 OSBPL3Q9H4L5 887 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 RAB6BQ9NRW1 208 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 USP16Q9Y5T5 823 aa9.94□□□□□ -0.82
SMG1-214ENST00000568038 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 KCPQ6ZWJ8 1503 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
SMG1-214ENST00000568038 VAC14Q08AM6 782 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 POU4F2Q12837 409 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 IRF5Q13568 498 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
SMG1-214ENST00000568038 CCNL1Q9UK58 526 aaPredicted RBP9.93□□□□□ -0.82
SMG1-214ENST00000568038 PLSCR1O15162 318 aa9.92□□□□□ -0.82
SMG1-214ENST00000568038 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
SMG1-214ENST00000568038 ITPK1Q13572 414 aa9.92□□□□□ -0.82
SMG1-214ENST00000568038 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms