RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NLRP2Q9NX02 1062 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
HERPUD1-212ENST00000567944 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 GNA15P30679 374 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 ATP2B2Q01814 1243 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 FMR1NBQ8N0W7 255 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 GALNT11Q8NCW6 608 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 FAM161BQ96MY7 647 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
HERPUD1-212ENST00000567944 FURINP09958 794 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 ZNF16P17020 682 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 CDC25BP30305 580 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 DAB2P98082 770 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 FBXO11Q86XK2 927 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 DTWD1Q8N5C7 304 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 ZNF576Q9H609 170 aa6.87□□□□□ -1.31
HERPUD1-212ENST00000567944 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 H3BRJ5 948 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 DLL1O00548 723 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 FAAP100Q0VG06 881 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 TRAK1Q9UPV9 953 aa6.86□□□□□ -1.31
HERPUD1-212ENST00000567944 PIK3R2O00459 728 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 GIPC1O14908 333 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 ESRRAP11474 423 aaPredicted RBP6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 FCGRTP55899 365 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 CARD10Q9BWT7 1032 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 KCNK4Q9NYG8 393 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 SPG7Q9UQ90 795 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 AK5Q9Y6K8 562 aa6.85□□□□□ -1.31
HERPUD1-212ENST00000567944 FSCN2O14926 492 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 CTSHP09668 335 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 SELPP16109 830 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 GRIK4Q16099 956 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 KRTAP1-3Q8IUG1 177 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 KLHDC7BQ96G42 594 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 FRMD6Q96NE9 622 aa6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 CLEC4MQ9H2X3 399 aaPredicted RBP6.84□□□□□ -1.31
HERPUD1-212ENST00000567944 SPDYE3A6NKU9 549 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 ADAM11O75078 769 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 B3GALT4O96024 378 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 ELNP15502 786 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 PIP4K2BP78356 416 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 PCDH1Q08174 1060 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 IKBKEQ14164 716 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 SHISA2Q6UWI4 295 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 WNT8BQ93098 351 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 SRCIN1Q9C0H9 1055 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
HERPUD1-212ENST00000567944 DDX3YO15523 660 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 USP17L7P0C7H9 530 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 RAC1P63000 192 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 FGD1P98174 961 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 MRPL58Q14197 206 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 RPS26P11Q5JNZ5 115 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 LDLRAD1Q5T700 205 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 MAP4K3Q8IVH8 894 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 SOX17Q9H6I2 414 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 SRA1Q9HD15 236 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 FAM8A1Q9UBU6 413 aa6.82□□□□□ -1.32
HERPUD1-212ENST00000567944 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 WISP1O95388 367 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 EIF4BP23588 611 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 GSTT1P30711 240 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 CABP4P57796 275 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 PSMD2Q13200 908 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 PRRT3Q5FWE3 981 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 DTHD1Q6ZMT9 781 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 SLC7A3Q8WY07 619 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
HERPUD1-212ENST00000567944 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 CHRNA4P43681 627 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 XPCQ01831 940 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 CD163Q86VB7 1156 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 KLHL23Q8NBE8 558 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 AKAP2Q9Y2D5 859 aa6.8□□□□□ -1.32
HERPUD1-212ENST00000567944 DLGAP3O95886 979 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms