RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MLH3Q9UHC1 1453 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 KRBA1A5PL33 1030 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 ICMTO60725 284 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 SPATA31C1P0DKV0 1188 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 EIF2AK2P19525 551 aaKnown RBP7.7□□□□□ -1.18
CAPN3-217ENST00000567817 PLA2G4EQ3MJ16 856 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-217ENST00000567817 XKR5Q6UX68 686 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 TXNDC2Q86VQ3 553 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 NSUN5Q96P11 429 aaKnown RBP7.7□□□□□ -1.18
CAPN3-217ENST00000567817 DIP2CQ9Y2E4 1556 aa7.7□□□□□ -1.18
CAPN3-217ENST00000567817 LOC102724428A0A0B4J2F2 783 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 GHRHP01286 108 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 IGHA1P01876 353 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 USP5P45974 858 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 SERPINB4P48594 390 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 AFF1P51825 1210 aaKnown RBP7.69□□□□□ -1.18
CAPN3-217ENST00000567817 SIK1P57059 783 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 PRRT3Q5FWE3 981 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 ZNF438Q7Z4V0 828 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 TTC16Q8NEE8 873 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 RBSNQ9H1K0 784 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 ELP3Q9H9T3 547 aa7.69□□□□□ -1.18
CAPN3-217ENST00000567817 H3BRB1 525 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 AAMPQ13685 434 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 HFE2Q6ZVN8 426 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 GLYCTKQ8IVS8 523 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
CAPN3-217ENST00000567817 TUT1Q9H6E5 874 aaKnown RBP7.68□□□□□ -1.18
CAPN3-217ENST00000567817 ANO2Q9NQ90 1003 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 POLIQ9UNA4 740 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
CAPN3-217ENST00000567817 MYO5CQ9NQX4 1742 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 FZD6O60353 706 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 KIF4AO95239 1232 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 BRD1O95696 1058 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 EHHADHQ08426 723 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 HYAL2Q12891 473 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 GRIK5Q16478 980 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 PLD4Q96BZ4 506 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 GGNBP2Q9H3C7 697 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 TMEM63CQ9P1W3 806 aa7.67□□□□□ -1.18
CAPN3-217ENST00000567817 CEP170BQ9Y4F5 1589 aaPredicted RBP7.67□□□□□ -1.18
CAPN3-217ENST00000567817 J3QW42 95 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 ITGB2P05107 769 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 TRIM28Q13263 835 aaKnown RBP7.66□□□□□ -1.18
CAPN3-217ENST00000567817 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
CAPN3-217ENST00000567817 A0A0A0MRY4 1105 aa7.65□□□□□ -1.18
CAPN3-217ENST00000567817 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
CAPN3-217ENST00000567817 ABCA6Q8N139 1617 aa7.65□□□□□ -1.18
CAPN3-217ENST00000567817 GJD3Q8N144 294 aa7.65□□□□□ -1.18
CAPN3-217ENST00000567817 CDK11AQ9UQ88 783 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-217ENST00000567817 SHANK2Q9UPX8 1470 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 RRBP1Q9P2E9 1410 aaKnown RBP7.64□□□□□ -1.19
CAPN3-217ENST00000567817 ZMYM3Q14202 1370 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 A6NHS1 94 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 MSTNO14793 375 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 RAC1P63000 192 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-217ENST00000567817 WFDC8Q8IUA0 241 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 CACTIN-AS1Q8N1I8 211 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 DTWD1Q8N5C7 304 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 NACC1Q96RE7 527 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 CCDC87Q9NVE4 849 aa7.64□□□□□ -1.19
CAPN3-217ENST00000567817 SUPT6HQ7KZ85 1726 aaKnown RBP7.64□□□□□ -1.19
CAPN3-217ENST00000567817 KIF14Q15058 1648 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 ARHGAP5Q13017 1502 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 CYP2E1P05181 493 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-217ENST00000567817 ECM1Q16610 540 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-217ENST00000567817 SNX29Q8TEQ0 813 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 PMEPA1Q969W9 287 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 SPOCK3Q9BQ16 436 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 CNTN3Q9P232 1028 aa7.63□□□□□ -1.19
CAPN3-217ENST00000567817 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
CAPN3-217ENST00000567817 A2ML1A8K2U0 1454 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 C1QTNF9BB2RNN3 333 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 APBA3O96018 575 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 PROCP04070 461 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 ELNP15502 786 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 CES1P23141 567 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 CHRNA4P43681 627 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 CD163Q86VB7 1156 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 NCAPG2Q86XI2 1143 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 FMR1NBQ8N0W7 255 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-217ENST00000567817 C1orf127Q8N9H9 656 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 KANSL3Q9P2N6 904 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 BRPF3Q9ULD4 1205 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 ARHGAP35Q9NRY4 1499 aa7.62□□□□□ -1.19
CAPN3-217ENST00000567817 RNF17Q9BXT8 1623 aaKnown RBP7.61□□□□□ -1.19
CAPN3-217ENST00000567817 NDUFB5O43674 189 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 TNFRSF21O75509 655 aa7.61□□□□□ -1.19
CAPN3-217ENST00000567817 SMNDC1O75940 238 aaKnown RBP eCLIP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms